@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu04490: (2016-06-07 )
MAEPILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMHKKIADERLDEVVERVGLTSAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEGTAVLFATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQTTEKAIIEVQPQEKALNWLTGNQYQAESQDGTIVVEVAKENIPELNRSLVGQDLNVFSITPYTQSLEDEFIKATTAHQEEGEELV

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]



ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]



ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
10 PsiBlast_PDB 83.6931% -95 - C1 -4YER 5.8 ?
1 PsiBlast_PDB 79.9342%-128 - C1 -1VPL - ? -
22 PsiBlast_CBE 74.9232%-135 - C1 -4YMU 4.8 ?
3 PsiBlast_PDB 74.4032%-133 - C1 -4YMT - ? -
2 PsiBlast_PDB 74.4032%-133 - C1 -4YMS - ? -
7 PsiBlast_PDB 73.7830%-111 - C1 -2IT1 - ? -
21 PsiBlast_CBE 73.5232%-132 - C1 -4YMV 5.3 ?
6 PsiBlast_PDB 73.4032%-131 - C1 -4YMW - ? -
9 PsiBlast_PDB 73.3032%-119 - C1 -4U02 - ? -
23 PsiBlast_CBE 73.2832%-119 - C1 -4U02 - ? -
5 PsiBlast_PDB 72.9532%-133 - C1 -4YMV 4.5 ?
4 PsiBlast_PDB 72.8632%-130 - C1 -4YMU 5.4 ?
24 PsiBlast_CBE 72.7732%-128 - C1 -4U02 - ? -
25 PsiBlast_CBE 72.6632%-120 - C1 -4U02 - ? -
51 Fugue 72.5023%-129 - C1 -3TUZ - METN_ECOLI -
8 PsiBlast_PDB 72.2232%-128 - C1 -4U00 5.1 ?
35 PsiBlast_CBE 71.6431%-145 - C1 -2OUK - ? -
32 PsiBlast_CBE 71.3631%-138 - C1 -2OUK - ? -
39 PsiBlast_CBE 70.7031%-139 - C1 -2OLK 5.4 ?
75 HHSearch 70.3229%-141 - C1 -4RVC - ? -
27 PsiBlast_CBE 67.1731%-132 - C1 -3C41 7.3 ?
46 PsiBlast_CBE 49.1731%-130 - C1 -4HLU 5.0 ECFA2_THEMA
45 PsiBlast_CBE 48.9231%-131 - C1 -4HLU 5.2 ECFA2_THEMA
57 HHSearch 48.0230% 16 - C1 -4YER 2.2 ?
44 PsiBlast_CBE 45.7431%-126 - C1 -4ZIR 5.2 ECFA2_THEMA