@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu05370: (2016-06-08 )
MSFPEEKKMKKLPKYRQIVHFIKEKIGNGEWPIGSKIPSQRTLAKDFQVNRSTVITALEELMADGLIEGTMGKGTVVINNTWTLMAKNSAPDWDQYVTSGIQMPSRKIVQEINQSESNTDLIQLSKGELSAEIFPLAVMKEMMGKVSQHMEAFGYEEPKGYLPLREALSNYLKTIGINVSSSSILIVSGALQALQLISMGLLQRGSTVYLDQPSYLYSLHVFQSAGMKLTGLPMDNEGLLPENVHLTRGERGRAILYTNPCFHNPTGILMSKKRREEILAVSENTQLPIIEDDIYRELWIDEIPPYPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSLSQRVAAEWFTSGHYQQHVEKVRQQLKVRRELALSALETHLKEVATWNIPKGGFFVWIKILPSISMKLLYTKALSKGILINLGSIYAQEKGNYIRLSYAYASLEDLQKGIYELGLMIKELASR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGU_A_3(2ZYJ)
LYSN_THET2
[Raw transfer]



PMP_C_6(3AV7)
?
[Raw transfer]



PMP_A_3(3AV7)
?
[Raw transfer]



PMP_A_3(3WX9)
?
[Raw transfer]



PLP_C_4(3AOV)
?
[Raw transfer]



PMP_C_8(3WX9)
?
[Raw transfer]



PLP_A_3(1WST)
?
[Raw transfer]



PLP_A_3(3AOW)
?
[Raw transfer]



PLP_C_5(3AOW)
?
[Raw transfer]



PLP_C_6(3ATH)
?
[Raw transfer]



AKG_C_6(3AOW)
?
[Raw transfer]
1 PsiBlast_PDB 73.0632%-116 - C1 -1X0M - ? -
5 PsiBlast_PDB 72.4432%-115 - C1 -3AV7 4.6 ?
23 PsiBlast_CBE 72.0432%-112 - C1 -3ATH 3.4 ?
4 PsiBlast_PDB 71.9532%-110 - C1 -3ATH - ? -
3 PsiBlast_PDB 71.8832%-112 - C1 -3AOW - ? -
2 PsiBlast_PDB 71.7832%-112 - C1 -3AOV - ? -
25 PsiBlast_CBE 71.6732%-111 - C1 -3AOV 3.5 ?
22 PsiBlast_CBE 71.5332%-112 - C1 -3AV7 4.6 ?
24 PsiBlast_CBE 71.3232%-111 - C1 -3AOW 3.1 ?
21 PsiBlast_CBE 71.2432%-112 - C1 -3WX9 3.7 ?
6 PsiBlast_PDB 71.0432%-113 - C1 -3WX9 3.7 ?
7 PsiBlast_PDB 68.9230%-109 - C1 -1WST 2.8 ?
62 HHSearch 68.5032%-108 - C1 -3AOW 3.4 ?
10 PsiBlast_PDB 68.1129%-116 - C1 -2ZP7 - LYSN_THET2 -
13 PsiBlast_PDB 68.0729%-113 - C1 -2ZYJ - LYSN_THET2 -
67 HHSearch 67.1930%-118 - C1 -2ZYJ 7.4 LYSN_THET2
11 PsiBlast_PDB 67.0629%-112 - C1 -3CBF - LYSN_THET2 -
12 PsiBlast_PDB 67.0329%-110 - C1 -2Z1Y - LYSN_THET2 -
9 PsiBlast_PDB 64.7429%-105 - C1 -2EGY - LYSN_THET2 -
65 HHSearch 64.6330%-115 - C1 -2ZC0 - ? -