@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu05910: (2016-06-09 )
MKQLKWRTVNPEETKAIAKLTAAFAKPGDVLTLEGDLGAGKTTFTKGFAEGLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQGVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEELSRHDNISN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_12(1HTW)
TSAE_HAEIN
[Raw transfer]




ADP_A_12(1HTW)
TSAE_HAEIN
[Raw transfer]




ADP_B_13(1HTW)
TSAE_HAEIN
[Raw transfer]




ADP_A_12(1HTW)
TSAE_HAEIN
[Raw transfer]




ADP_C_14(1HTW)
TSAE_HAEIN
[Raw transfer]




32 Fugue 94.9433%-136 - C3 -1HTW 8.1 TSAE_HAEIN
42 HHSearch 88.0833%-131 - C3 -1HTW 8.2 TSAE_HAEIN
1 PsiBlast_PDB 80.4240%-144 - C3 -1HTW 6.9 TSAE_HAEIN
22 PsiBlast_CBE 79.2240%-139 - C3 -1HTW 7.0 TSAE_HAEIN
24 PsiBlast_CBE 77.3840%-128 - C3 -1FL9 - TSAE_HAEIN -
21 PsiBlast_CBE 77.1440%-128 - C3 -1HTW 6.1 TSAE_HAEIN
2 PsiBlast_PDB 75.6340%-107 - C3 -1FL9 - TSAE_HAEIN -
23 PsiBlast_CBE 73.4740%-116 - C3 -1FL9 - TSAE_HAEIN -
33 Fugue 64.6521% -81 - C3 -3M6A - LON1_BACSU -
36 Fugue 53.3816%-109 - C3 -1JR3 - DPO3X_ECOLI -
34 Fugue 52.6016%-106 - C3 -1A5T - ? -
47 HHSearch 46.2030%-143 - C3 -3GD7 - CFTR_HUMAN (first) -
35 Fugue 45.5518%-116 - C3 -4XGU - PCH2_CAEEL -
46 HHSearch 44.6924%-171 - C3 -5C78 - PGLK_CAMJE -
41 Fugue 44.4219% -53 - C2 -4QT6 - -
56 HHSearch 44.1123%-168 - C3 -4PL0 - MCJD_ECOLX -
45 HHSearch 43.9528%-141 * C3 *4FIN - ETTA_ECOLI -
37 Fugue 42.1015% -50 - C1 -3D30 - YOAJ_BACSU -
60 HHSearch 41.8420%-107 - C3 -4Q4H - ? -
59 HHSearch 40.7320%-142 - C3 -4MRS - ATM1_NOVAD -