@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu06430: (2016-06-10 )
MSKQIIYPGAVIGIIGGGQLGKMMAVSAKQMGYKVAVVDPVKDSPCGQVADVEITAHYNDREAIRKLAEISDIITYEFENIDYDALHWLKDHAYLPQGSELLLITQNRETEKKAIQSAGCEVAPYSIVKTKNELKQAVQELRLPAVLKTCRGGYDGKGQFVIKEEAQMEQAAALLEHGTCILESWVSFKMELSVIVVRSVNGEISTFPTAENIHHNNILFQSIVPARVEKGIQQKAADLAVKLADELNLVGPLAVEMFLTEDGELLVNELAPRPHNSGHYTLDLCETSQFEQHIRAVCGLPLGKTDLLKPGMMVNLLGDEVKLVEEDPELLKEAKLYIYGKHEIKKGRKMGHITFMKQPEDEWIQEITNKWMNRDGGQAE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3ETH)
PURK_ECOLI
[Raw transfer]



ADP_A_3(3QFF)
?
[Raw transfer]



ADP_A_3(3V4S)
?
[Raw transfer]



ADP_A_3(3ETJ)
PURK_ECOLI
[Raw transfer]



ATP_B_6(3V4S)
?
[Raw transfer]



ATP_B_6(3ETH)
PURK_ECOLI
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ANP_A_2(4MA5)
?
[Raw transfer]



ADP_B_8(3ETJ)
PURK_ECOLI
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ATP_B_12(4DLK)
?
[Raw transfer]



ADP_B_4(3QFF)
?
[Raw transfer]



ADP_A_3(3R5H)
?
[Raw transfer]



ADP_B_6(3R5H)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_B_5(3AW8)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_A_2(4MA0)
?
[Raw transfer]



FMT_A_15(4M9U)
?
[Raw transfer]



ATP_A_7(4DLK)
?
[Raw transfer]



ATP_A_8(4DLK)
?
[Raw transfer]
83 HHSearch 79.9159%-104 - C2 -3Q2O - ? -
1 PsiBlast_PDB 79.6161%-111 - C2 -4DLK 4.3 ?
3 PsiBlast_PDB 79.4461%-111 - C2 -3QFF 7.0 ?
4 PsiBlast_PDB 79.2061%-108 - C2 -3R5H 7.1 ?
23 PsiBlast_CBE 79.1261%-109 - C2 -3QFF 5.8 ?
24 PsiBlast_CBE 79.0061%-107 - C2 -3Q2O - ? -
2 PsiBlast_PDB 78.9561%-107 - C2 -3Q2O - ? -
21 PsiBlast_CBE 78.3261%-106 - C2 -4DLK 7.7 ?
5 PsiBlast_PDB 78.0561%-105 - C2 -3V4S 7.8 ?
22 PsiBlast_CBE 77.2361%-106 - C2 -3R5H 6.2 ?
25 PsiBlast_CBE 77.1861%-108 - C2 -3V4S 8.0 ?
84 HHSearch 68.1144% -88 - C2 -3ORQ 4.8 ?
82 HHSearch 67.0640% -95 - C2 -4E4T - ? -
7 PsiBlast_PDB 67.0442% -85 - C2 -3ORQ 4.9 ?
8 PsiBlast_PDB 66.0642% -87 - C2 -3ORR - ? -
26 PsiBlast_CBE 65.7139% -98 - C2 -4E4T - ? -
6 PsiBlast_PDB 65.4239% -94 - C2 -4E4T - ? -
91 HHSearch 63.5943% -98 - C2 -3AX6 - ? -
87 HHSearch 62.8034% -85 - C2 -3K5I - ? -
88 HHSearch 62.4838% -93 * C2 *3AW8 4.5 ?
14 PsiBlast_PDB 61.2935% -95 - C2 -4MAM 6.7 ?
86 HHSearch 60.8934% -92 - C2 -4MAM 7.3 ?
15 PsiBlast_PDB 60.7735% -96 - C2 -4M9U 2.3 ?
12 PsiBlast_PDB 60.2535% -95 - C2 -4MA0 5.3 ?
13 PsiBlast_PDB 60.0035% -99 - C2 -4MA5 5.8 ?
10 PsiBlast_PDB 57.6238% -92 - C2 -3AW8 4.5 ?
27 PsiBlast_CBE 56.7138% -95 - C2 -3AW8 5.4 ?
20 PsiBlast_PDB 54.4831%-109 - C2 -3ETH 7.1 PURK_ECOLI
37 PsiBlast_CBE 54.1031%-111 - C2 -3ETJ 7.0 PURK_ECOLI
36 PsiBlast_CBE 53.7131%-117 - C2 -3ETJ 6.4 PURK_ECOLI
38 PsiBlast_CBE 53.6031%-111 - C2 -3ETH 7.7 PURK_ECOLI