@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu06450: (2016-06-10 )
MNIVKNELLYEGKAKKIYKTDDENTLYVVYKDSATAFNGEKKAEISGKGRLNNEISSLIFKHLHAKGINNHFIERISETEQLIKKVTIVPLEVVVRNVVAGSMSKRLGIPEGTELEQPIIEFYYKDDALGDPLITEDHIWLLKAATPEQVETIKSITTIVNEELQSIFDDCHVRLIDFKLEFGLDAEGQVLLADEISPDTCRLWDKETNEKLDKDLFRRNLGSLTDAYEEIFNRLGGIHHV

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_8(3NUA)
PUR7_CLOP1
[Raw transfer]




AMP_A_11(4O81)
PUR7_PYRHO
[Raw transfer]




C5P_A_2(4O7Y)
PUR7_PYRHO
[Raw transfer]




AIR_A_3(4FE2)
PUR7_STRPN
[Raw transfer]




TYD_A_2(4O7S)
PUR7_PYRHO
[Raw transfer]




U5P_A_2(4O7R)
PUR7_PYRHO
[Raw transfer]




ATP_A_7(2Z02)
PUR7_METJA
[Raw transfer]




ATP_A_7(2Z02)
PUR7_METJA
[Raw transfer]




ATP_A_3(4O7W)
PUR7_PYRHO
[Raw transfer]




EDO_A_7(3KRE)
PUR7_EHRCR
[Raw transfer]




EDO_A_7(3KRE)
PUR7_EHRCR
[Raw transfer]




ATP_B_6(2Z02)
PUR7_METJA
[Raw transfer]




ADP_A_12(2YWV)
?
[Raw transfer]




ADP_A_3(4O7V)
PUR7_PYRHO
[Raw transfer]




ADP_B_13(2YWV)
?
[Raw transfer]




ADP_A_4(4FGR)
PUR7_STRPN
[Raw transfer]




ADP_A_4(4NYE)
PUR7_STRPN
[Raw transfer]




ADP_B_11(2GQS)
PUR7_ECOLI
[Raw transfer]




ADP_A_3(3NUA)
PUR7_CLOP1
[Raw transfer]




EDO_A_4(3KRE)
PUR7_EHRCR
[Raw transfer]




ADP_A_9(2GQS)
PUR7_ECOLI
[Raw transfer]




ADP_A_3(4O7T)
PUR7_PYRHO
[Raw transfer]




ADP_A_4(2YZL)
PUR7_METJA
[Raw transfer]




ADP_A_3(3NUA)
PUR7_CLOP1
[Raw transfer]




ADP_A_9(2GQS)
PUR7_ECOLI
[Raw transfer]




ADP_A_4(4FE2)
PUR7_STRPN
[Raw transfer]




ADP_A_8(4O86)
PUR7_PYRHO
[Raw transfer]




ADP_B_12(4FE2)
PUR7_STRPN
[Raw transfer]




ADP_B_8(4FGR)
PUR7_STRPN
[Raw transfer]




ADP_B_8(4NYE)
PUR7_STRPN
[Raw transfer]




AMP_A_10(4O81)
PUR7_PYRHO
[Raw transfer]




36 HHSearch 90.3868% -66 - C3 -2YWV - ? -
21 PsiBlast_CBE 89.4268% -65 - C3 -2YWV 6.8 ?
1 PsiBlast_PDB 89.1368% -67 - C3 -2YWV 6.6 ?
33 HHSearch 82.5458% -66 - C3 -3NUA 8.1 PUR7_CLOP1
32 HHSearch 82.5247% -75 - C3 -2Z02 6.0 PUR7_METJA
37 HHSearch 82.3353% -61 - C3 -4FE2 5.1 PUR7_STRPN
22 PsiBlast_CBE 82.2058% -66 - C3 -3NUA 6.4 PUR7_CLOP1
17 PsiBlast_PDB 82.0547% -71 - C3 -2YZL 5.7 PUR7_METJA
4 PsiBlast_PDB 81.9854% -61 - C3 -4FGR 6.4 PUR7_STRPN
6 PsiBlast_PDB 81.8048% -75 - C3 -3KRE 3.2 PUR7_EHRCR
2 PsiBlast_PDB 81.7258% -66 - C3 -3NUA 8.1 PUR7_CLOP1
5 PsiBlast_PDB 81.6954% -62 - C3 -4NYE 6.3 PUR7_STRPN
3 PsiBlast_PDB 81.6254% -61 - C3 -4FE2 7.7 PUR7_STRPN
26 PsiBlast_CBE 81.5847% -72 - C3 -2Z02 6.8 PUR7_METJA
34 HHSearch 81.2447% -73 - C3 -3KRE 3.2 PUR7_EHRCR
39 HHSearch 80.6649% -79 - C3 -3U55 - PUR7_PYRHO -
25 PsiBlast_CBE 80.5354% -60 - C3 -4FE2 6.0 PUR7_STRPN
18 PsiBlast_PDB 80.3947% -72 - C3 -2Z02 6.4 PUR7_METJA
24 PsiBlast_CBE 80.0554% -64 - C3 -4FGR 6.6 PUR7_STRPN
23 PsiBlast_CBE 80.0354% -62 - C3 -4NYE 6.4 PUR7_STRPN
12 PsiBlast_PDB 79.1848% -85 - C3 -4O7T 5.4 PUR7_PYRHO
20 PsiBlast_PDB 78.9749% -85 - C3 -4O81 6.4 PUR7_PYRHO
16 PsiBlast_PDB 78.8048% -83 - C3 -4O86 5.2 PUR7_PYRHO
11 PsiBlast_PDB 78.6448% -96 - C3 -4O7S 6.3 PUR7_PYRHO
14 PsiBlast_PDB 78.1748% -76 - C3 -4O7W 5.5 PUR7_PYRHO
15 PsiBlast_PDB 77.7548% -80 - C3 -4O7Y 5.7 PUR7_PYRHO
13 PsiBlast_PDB 77.5848% -81 - C3 -4O7V 4.5 PUR7_PYRHO
10 PsiBlast_PDB 77.2848% -76 - C3 -4O7R 5.7 PUR7_PYRHO
47 Fugue 76.5442% -51 * C3 *2GQS 6.7 PUR7_ECOLI
28 PsiBlast_CBE 75.3943% -53 - C3 -2GQS 6.7 PUR7_ECOLI
27 PsiBlast_CBE 74.5843% -55 - C3 -2GQS 7.1 PUR7_ECOLI