@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu06480: (2016-06-10 )
MSLLLEPSKEQIKEEKLYQQMGVSDDEFALIESILGRLPNYTEIGIFSVMWSEHCSYKNSKPILRKFPTSGERVLQGPGEGAGIVDIGDNQAVVFKIESHNHPSALEPYQGAATGVGGIIRDVFSMGARPIAVLNSLRFGELTSPRVKYLFEEVVAGIAGYGNCIGIPTVGGEVQFDSSYEGNPLVNAMCVGLINHEDIKKGQAKGVGNTVMYVGAKTGRDGIHGATFASEEMSDSSEEKRSAVQVGDPFMEKLLLEACLEVIQCDALVGIQDMGAAGLTSSSAEMASKAGSGIEMNLDLIPQRETGMTAYEMMLSESQERMLLVIERGREQEIIDIFDKYDLEAVSVGHVTDDKMLRLTHKGEVVCELPVDALAEEAPVYHKPSQEPAYYREFLETDVPAPQIEDANEMLKALLQQPTIASKEWVYDQYDYMVRTNTVVAPGSDAGVLRIRGTKKALAMTTDCNARYLYLDPEVGGKIAVAEAARNIICSGAEPLAVTDNLNFGNPEKPEIFWQIEKAADGISEACNVLSTPVIGGNVSLYNESNGTAIYPTPVIGMVGLIEDTAHITTQHFKQAGDLVYVIGETKPEFAGSELQKMTEGRIYGKAPQIDLDVELSRQKALLDAIKKGFVQSAHDVSEGGLGVAIAESVMTTENLGANVTVEGEAALLFSESQSRFVVSVKKEHQAAFEATVKDAVHIGEVTADGILAIQNQDGQQMIHAQTKELERVWKGAIPCLLKSKA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_5(2HRY)
PURL_THEMA
[Raw transfer]



ACP_A_6(2HS4)
PURL_THEMA
[Raw transfer]



ADP_A_2(3VIU)
PURL_THET8
[Raw transfer]



ADP_A_2(3VIU)
PURL_THET8
[Raw transfer]



ATP_A_5(2HS0)
PURL_THEMA
[Raw transfer]



ADP_A_5(2HRU)
PURL_THEMA
[Raw transfer]



FGR_A_3(2HS3)
PURL_THEMA
[Raw transfer]
21 HHSearch 81.4147% -74 - C3 -3VIU 4.8 PURL_THET8
1 PsiBlast_PDB 77.2548% -70 - C3 -3VIU 4.8 PURL_THET8
6 PsiBlast_PDB 65.2040% -96 - C3 -2HRY 5.4 PURL_THEMA
2 PsiBlast_PDB 65.1940% -95 - C3 -2HS0 4.4 PURL_THEMA
3 PsiBlast_PDB 64.8940% -84 - C3 -2HS3 5.2 PURL_THEMA
10 PsiBlast_PDB 64.5324% -65 - C3 -4MGH - PUR4_SALTY -
14 PsiBlast_PDB 63.9724% -65 - C3 -4LGY - PUR4_SALTY -
7 PsiBlast_PDB 63.9724% -65 - C3 -1T3T - PUR4_SALTY -
5 PsiBlast_PDB 63.9640% -93 - C3 -2HRU 4.7 PURL_THEMA
13 PsiBlast_PDB 63.7124% -67 - C3 -4R7G - PUR4_SALTY -
11 PsiBlast_PDB 63.6524% -67 - C3 -3UGJ - PUR4_SALTY -
12 PsiBlast_PDB 63.4324% -66 - C3 -4L78 - PUR4_SALTY -
22 HHSearch 63.3823% -64 - C3 -4LGY - PUR4_SALTY -
4 PsiBlast_PDB 62.9640% -85 - C3 -2HS4 4.6 PURL_THEMA
8 PsiBlast_PDB 62.9024% -66 - C3 -3UJN - PUR4_SALTY -
9 PsiBlast_PDB 62.4124% -66 - C3 -3UMM - PUR4_SALTY -
27 HHSearch 43.0522% -90 - C3 -3VIU - PURL_THET8 -
36 HHSearch 41.2115%-126 - C3 -2Z01 - PUR5_GEOKA -
24 HHSearch 37.4820% -89 - C3 -3U0O - SELD_ECOLI -
16 PsiBlast_PDB 36.9324% -88 - C3 -3WJQ - ? -