@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu06680: (2016-06-10 )
MSLFDHKITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYAKELDEAVDGRSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNMDEFAMGSSTENSAYKLTKNPWNLDTVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDSTSANVDVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEARESVLAALKVLEGLGATWEEVSLPHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRAEGFGNEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEKYDVIVGPTTPTPAFKIGENTKDPLTMYANDILTIPVNLAGVPGISVPCGLADGLPLGLQIIGKHFDESTVYRVAHAFEQATDHHKAKPEL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASN_A_5(2DQN)
GATA_STAAM
[Raw transfer]




GLN_A_5(2F2A)
GATA_STAAM
[Raw transfer]




QKV_A_4(3QKV)
FAAH1_RAT
[Raw transfer]




QKV_B_3(3QKV)
FAAH1_RAT
[Raw transfer]




PIX_A_3(3LJ6)
FAAH1_RAT
[Raw transfer]




PIX_A_3(2WAP)
FAAH1_RAT
[Raw transfer]




PF7_A_5(2VYA)
FAAH1_RAT
[Raw transfer]




PIX_B_5(3LJ6)
FAAH1_RAT
[Raw transfer]




PF7_B_9(2VYA)
FAAH1_RAT
[Raw transfer]




PIX_B_6(2WAP)
FAAH1_RAT
[Raw transfer]




OHO_A_4(4DO3)
FAAH1_RAT
[Raw transfer]




OHO_B_6(4DO3)
FAAH1_RAT
[Raw transfer]




TAR_A_3(4ISS)
?
[Raw transfer]




MPD_A_6(2GI3)
GATA_THEMA
[Raw transfer]




101 HHSearch 86.6164% -49 - C3 -3IP4 - GATA_STAAM -
5 PsiBlast_PDB 86.2664% -49 - C3 -3IP4 - GATA_STAAM -
6 PsiBlast_PDB 86.1264% -51 - C3 -2F2A 4.3 GATA_STAAM
1 PsiBlast_PDB 85.6964% -49 * C3 *2DF4 - GATA_STAAM -
2 PsiBlast_PDB 85.6764% -51 - C3 -2DQN 2.8 GATA_STAAM
3 PsiBlast_PDB 85.6464% -50 - C3 -2G5H - GATA_STAAM -
4 PsiBlast_PDB 85.0064% -45 - C3 -2G5I - GATA_STAAM -
102 HHSearch 80.6352% -57 - C3 -4WJ3 - GATA_PSEAE -
10 PsiBlast_PDB 80.3452% -55 - C3 -4WJ3 - GATA_PSEAE -
9 PsiBlast_PDB 80.2054% -49 - C3 -3H0R - GATA_AQUAE -
27 PsiBlast_CBE 79.4954% -50 - C3 -3H0R - GATA_AQUAE -
7 PsiBlast_PDB 79.3854% -48 - C3 -3H0L - GATA_AQUAE -
34 PsiBlast_CBE 79.3654% -51 - C3 -3H0M - GATA_AQUAE -
8 PsiBlast_PDB 79.1754% -51 - C3 -3H0M - GATA_AQUAE -
103 HHSearch 79.0956% -48 - C3 -3H0L - GATA_AQUAE -
108 HHSearch 76.1852% -63 - C3 -2GI3 2.7 GATA_THEMA
12 PsiBlast_PDB 75.8951% -64 - C3 -2GI3 - GATA_THEMA -
11 PsiBlast_PDB 75.4852% -61 - C3 -3AL0 - GATA_THEMA -
104 HHSearch 74.9847% -54 - C3 -3KFU - GATA_THET8 -
13 PsiBlast_PDB 74.3548% -52 - C3 -3KFU - GATA_THET8 -
68 PsiBlast_CBE 38.4035% -27 - C3 -4DO3 3.9 FAAH1_RAT
70 PsiBlast_CBE 38.1635% -24 - C3 -3QKV 2.1 FAAH1_RAT
87 PsiBlast_CBE 38.0935% -30 - C3 -3LJ6 3.7 FAAH1_RAT
88 PsiBlast_CBE 37.8535% -29 - C3 -3LJ6 3.5 FAAH1_RAT
99 PsiBlast_CBE 37.6235% -25 - C3 -2VYA 3.4 FAAH1_RAT
69 PsiBlast_CBE 37.5935% -24 - C3 -3QKV 2.4 FAAH1_RAT
67 PsiBlast_CBE 37.4435% -23 - C3 -4DO3 3.9 FAAH1_RAT
76 PsiBlast_CBE 37.0935% -27 - C3 -2WAP 2.8 FAAH1_RAT
75 PsiBlast_CBE 36.9135% -25 - C3 -2WAP 3.3 FAAH1_RAT
100 PsiBlast_CBE 36.3335% -26 - C3 -2VYA 3.4 FAAH1_RAT