@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu07270: (2016-06-11 )
MKAVILCGGKGTRMSEVTNDIPKPLAMIGGKPILWHIMKIYQYYGVNEFILLLGYKGEKIKEYFLDYEWKHNSLTLDSSTGEVQMLGQPETWKITFLETGVDTLTAGRILQAKDYIGDETFLLTYGDGLANINLFHLISYHQTKGAAATVTGIDKVSQFGTLTVEDGMAKTFSEKTSSDGIINGGFFVLSPKVFDYLPKDGNTMFEDEPLKNLAKDGELAVYRHYGFWTAIDTYKNLLEVNKMWNQGQQVWKVW

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_A_5(1WVC)
RFBF_SALTI
[Raw transfer]




C5G_A_3(1TZF)
RFBF_SALTI
[Raw transfer]




C5G_A_3(1TZF)
RFBF_SALTI
[Raw transfer]




C5G_A_3(1TZF)
RFBF_SALTI
[Raw transfer]




41 HHSearch 79.7043%-127 - C1 -1TZF 6.6 RFBF_SALTI
63 Fugue 78.3241%-128 - C1 -1TZF 6.6 RFBF_SALTI
1 PsiBlast_PDB 77.6842%-127 - C1 -1TZF 6.6 RFBF_SALTI
2 PsiBlast_PDB 77.4542%-131 - C1 -1WVC 6.6 RFBF_SALTI
64 Fugue 68.3626%-149 - C1 -4MND - DIPPS_ARCFU -
54 HHSearch 60.7720%-163 - C1 -3BRK - GLGC_RHIRD -
55 HHSearch 56.7824%-142 - C1 -4Y7U - ? -
51 HHSearch 55.8620%-127 - C1 -5I1F - ? -
5 PsiBlast_PDB 54.2825%-138 - C1 -4MND - DIPPS_ARCFU -
52 HHSearch 54.1719%-162 - C1 -1YP2 - GLGS_SOLTU -
58 HHSearch 54.0220%-139 - C1 -4G3Q - GLMU_MYCTU -
42 HHSearch 53.2819%-150 - C1 -1LVW - ? -
9 PsiBlast_PDB 52.7524%-133 - C1 -2GGO - ? -
53 HHSearch 52.5319%-140 - C1 -4HO4 - ? -
50 HHSearch 52.1019%-137 - C1 -4ECM - ? -
10 PsiBlast_PDB 52.0724%-130 - C1 -2GGQ - ? -
72 Fugue 51.8121%-137 - C1 -1FXJ - GLMU_ECOLI -
43 HHSearch 51.2820%-139 * C1 *1MC3 - RMLA2_ECOLI -
7 PsiBlast_PDB 51.0422%-129 - C1 -4Y7U - ? -
4 PsiBlast_PDB 51.0325%-154 - C1 -2XMH - DIPPS_ARCFU -