@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu07370: (2016-06-11 )
MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIAGLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVNDVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAEREAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQTGPQSSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGIIGPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVIDYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFLDRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAPKPAAEEKTAEAEPKKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKIQELMAEQAKTAEELEAAMDRWTELSLMIEELES

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




GOL_A_10(4FIN)
ETTA_ECOLI
[Raw transfer]




ADP_A_5(1YQT)
?
[Raw transfer]




ADP_B_4(3J15)
?
[Raw transfer]




24 HHSearch 75.6534% -87 - C1 -4FIN 3.0 ETTA_ECOLI
2 PsiBlast_PDB 75.2635% -84 - C1 -4FIN - ETTA_ECOLI -
25 HHSearch 74.3928%-109 - C1 -2IW3 - EF3A_YEAST -
1 PsiBlast_PDB 67.8935% -55 - C1 -3J5S - ETTA_ECOLI -
27 HHSearch 54.6125% -92 - C1 -3BK7 - ? -
31 HHSearch 51.6523% -90 - C1 -3OZX - ? -
9 PsiBlast_PDB 51.0226% -71 - C1 -1YQT 4.7 ?
43 HHSearch 50.9926%-135 - C1 -4YER - ? -
29 HHSearch 49.4619% -79 - C1 -3J16 - RLI1_YEAST -
10 PsiBlast_PDB 48.8926% -82 - C1 -3OZX - ? -
7 PsiBlast_PDB 48.8726% -89 - C1 -3BK7 - ? -
8 PsiBlast_PDB 48.2726% -83 - C1 -3J15 2.7 ?
28 HHSearch 48.0924% -87 - C1 -1YQT - ? -
45 HHSearch 47.7625%-143 - C1 -4TQU - ? -
42 HHSearch 46.4727%-109 * C1 *4YER - ? -
3 PsiBlast_PDB 46.4027%-107 - C1 -2IWH - EF3A_YEAST -
4 PsiBlast_PDB 45.8427%-103 - C1 -2IX3 - EF3A_YEAST -
21 PsiBlast_CBE 45.6131%-114 - C1 -4HLU - ECFA2_THEMA -
6 PsiBlast_PDB 45.2927%-106 - C1 -2IW3 - EF3A_YEAST -
22 PsiBlast_CBE 44.9131%-112 - C1 -4HLU - ECFA2_THEMA -