@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu07840: (2016-06-12 )
MRIQKRRTHVENILRILLPPIMILSLILPTPPIHAEESAAPQVHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHPIISVMNALKYDAGTLGNHEFNYGLDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENAVFDLATKTKGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMPSSWGKYLGVIDLKLEKADGSWKVADSKGSIESIAGNVTSRNETVTNTIQQTHQNTLEYVRKPVGKTEADINSFFAQVKDDPSIQIVTDAQKWYAEKEMKDTEYKNLPILSAGAPFKAGGRNGANYYTNIPAGDLAIKNVGDLYLYDNTVQIVKLTGSEVKDWLEMSAGQFNQIDPAKGGDQALLNENFRSYNFDVIDGVTYQVDVTKPAKYNENGKVINADSSRIINLSYEGKPISPSQEFLVVTNNYRASGGGGFPHLTSDKIVHGSAVENRQVLMDYIIEQKTVNPKADNNWSIAPVSGTNLTFESSLLAKPFADKADDVAYVGKSANEGYGVYKLQFDDDSNPDPPKDGLWDLTVMHTNDTHAHLDDAARRMTKINEVRSETNHNILLDAGDVFSGDLYFTKWNGLADLKMMNMMGYDAMTFGNHEFDKGPTVLSDFLSGNSATVDPANRYHFEAPEFPIVSANVDVSNEPKLKSFVKKPQTFTAGEKKEAGIHPYILLDVDGEKVAVFGLTTEDTATTSSPGKSIVFNDAFETAQNTVKAIQEEEKVNKIIALTHIGHNRDLELAKKVKGIDLIIGGHTHTLVDKMEVVNNEEPTIVAQAKEYGQFLGRVDVAFDEKGVVQTDKSNLSVLPIDEHTEENPEAKQELDQFKNELEDVKNEKVGYTDVALDGQREHVRTKETNLGNFIADGMLAKAKEAAGARIAITNGGGIRAGIDKGDITLGEVLNVMPFGNTLYVADLTGKQIKEALEQGLSNVENGGGAFPQVAGIEYTFTLNNKPGHRVLEVKIESPNGDKVAINTDDTYRVATNNFVGAGGDGYSVFTEASHGEDLGYVDYEIFTEQLKKLGNKVSPKVEGRIKEVFLPTKQKDGSWTLDEDKFAIYAKNANTPFVYYGIHEGSQEKPINLKVKKDQVKLLKERESDPSLTMFNYWYSMKMPMANLKTADTAIGIKSTGELDVSLSDVYDFTVKQKGKEIKSFKEPVQLSLRMFDIEEAHNPAIYHVDRKKKAFTKTGHGSVDDDMVTGYTNHFSEYTILNSGSNNKPPAFPSDQPTGGDDGNHGGGSDKPGGKQPTDGNGGNDTPPGTQPTNGSGGNGSGGSGTDGPAGGLLPDTATSMYSILLAGFLISALGTAMYLHQRRKQNRANQA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3D1_A_4(4Q7F)
?
[Raw transfer]



CIT_A_5(3GVE)
NTPES_BACSU
[Raw transfer]



CIT_A_5(3GVE)
NTPES_BACSU
[Raw transfer]



EPE_A_4(3JYF)
?
[Raw transfer]



MLT_A_7(5EQV)
?
[Raw transfer]



MLT_A_7(5EQV)
?
[Raw transfer]



AKG_A_4(3QFK)
?
[Raw transfer]
1 PsiBlast_PDB 82.0798% -71 - C1 -3GVE 2.7 NTPES_BACSU
38 HHSearch 81.9099% -71 - C1 -3GVE 2.7 NTPES_BACSU
8 PsiBlast_PDB 79.7432% -76 - C1 -4H2I - 5NTD_HUMAN -
2 PsiBlast_PDB 79.4639% -83 - C1 -2Z1A - ? -
24 HHSearch 79.0443% -80 - C1 -2Z1A - ? -
6 PsiBlast_PDB 78.4432% -79 - C1 -4H2F - 5NTD_HUMAN -
22 HHSearch 78.0335% -83 - C1 -4H2G - 5NTD_HUMAN -
7 PsiBlast_PDB 77.8232% -80 - C1 -4H2G - 5NTD_HUMAN -
21 PsiBlast_CBE 74.7931% -77 - C1 -4H1S - 5NTD_HUMAN -
10 PsiBlast_PDB 74.7231% -77 - C1 -4H1S - 5NTD_HUMAN -
5 PsiBlast_PDB 74.6632% -82 - C1 -4H1Y - 5NTD_HUMAN -
9 PsiBlast_PDB 74.3932% -82 - C1 -4H2B - 5NTD_HUMAN -
11 PsiBlast_PDB 72.8529% -72 - C1 -1HP1 - USHA_ECOLI -
16 PsiBlast_PDB 72.7929% -70 - C1 -1OI8 - USHA_ECOLI -
19 PsiBlast_PDB 72.6129% -72 - C1 -4WWL - USHA_ECOLI -
12 PsiBlast_PDB 72.4129% -73 - C1 -1OID - USHA_ECOLI -
44 Fugue 72.0330% -61 - C1 -3ZTV - 5NTD_HAEIN -
29 HHSearch 71.9732% -69 - C1 -1HP1 - USHA_ECOLI -
18 PsiBlast_PDB 71.4529% -68 - C1 -1USH - USHA_ECOLI -
13 PsiBlast_PDB 71.2429% -72 - C1 -1OIE - USHA_ECOLI -
4 PsiBlast_PDB 68.6444% -90 - C1 -3JYF 2.7 ?
3 PsiBlast_PDB 67.0744% -81 - C1 -5EQV 3.2 ?
39 HHSearch 64.7043% -82 - C1 -5EQV 3.2 ?