@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08210: (2016-06-12 )
MQKALSFLKPYSLLAGIALILMLTELAVELMQPLLIAKIIDDGILKQDLRHVWIWGTVMIGLTVLSFAAGMLNSFYAAHVSQSFSYDTRKGLFQKIQSFSYSTFGQFSSSSYITRLTNDVTQVQNMIFMSLRFMLRAPLMIAGGIVLSLAVNVKLGFFLLVTIPILILFLLWVLRKGGALFRSVQKRLDQVNTIMQENLIAIKLIKALLRGSHEVKRFIKANTRLMEKTVSAFQLVEFTMPVLMLLMNLCILLILWAGSYSITSGSTQVGDVVAIINYATRITGALSMFPFLIMIFTRAKASGDRIGEVLETEGDEREEGTISDRLSGRIEFQHVSFRYPEMDREALRNVSFSAKPRETIAILGATGSGKSTLFQLIPRLYQPDSGRIYIDEKPVQDIPAEGLRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKLAQIHETILKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDDSTSALDLQTEAKLLEAISTYHCTTLIITQKITTAMKADQILLLEDGELIEKGTHSELLSESQLYKRIYESQFGREGSESC

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(2FGK)

[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_H_8(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_2(4K8O)

[Raw transfer]




ATP_D_6(2IXE)
TAP1_RAT
[Raw transfer]




ATP_D_12(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_15(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(2PZE)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_6(2PZE)
CFTR_HUMAN
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




ANP_A_3(3QF4)
?
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_H_8(2FGK)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_2(2IXG)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_G_7(2FGJ)

[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ATP_D_6(2IXE)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]




BME_A_2(3NH6)

[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




2 PsiBlast_PDB 87.8843%-135 - C1 -4Q4A - ? -
1 PsiBlast_PDB 86.6243%-136 - C1 -3QF4 6.3 ?
120 HHSearch 85.0144%-128 - C1 -4Q4H - ? -
3 PsiBlast_PDB 84.8043%-129 - C1 -4Q4H - ? -
4 PsiBlast_PDB 80.8943%-122 - C1 -4Q4J - ? -
32 PsiBlast_CBE 73.6831%-140 - C1 -4Q4A - Y288_THEMA -
33 PsiBlast_CBE 72.9731%-144 - C1 -3QF4 - Y288_THEMA -
118 HHSearch 70.9432%-125 - C1 -4A82 - Y1866_STAAM -
21 PsiBlast_CBE 70.9031%-122 - C1 -2ONJ - Y1866_STAAM -
22 PsiBlast_CBE 70.0631%-122 - C1 -2HYD - Y1866_STAAM -
7 PsiBlast_PDB 69.8531%-124 - C1 -4A82 - Y1866_STAAM -
5 PsiBlast_PDB 69.1931%-122 - C1 -2HYD - Y1866_STAAM -
6 PsiBlast_PDB 68.6531%-122 - C1 -2ONJ - Y1866_STAAM -
26 PsiBlast_CBE 68.0931% - - C1 -3B5Z 4.1 MSBA_SALTY
10 PsiBlast_PDB 68.0831% - - C1 -3B5Z 3.7 MSBA_SALTY
31 PsiBlast_CBE 68.0731% - - C1 -3B5Y 3.5 MSBA_SALTY
30 PsiBlast_CBE 68.0731% - - C1 -3B5Y 3.6 MSBA_SALTY
29 PsiBlast_CBE 68.0731% - - C1 -3B5Y 3.6 MSBA_SALTY
28 PsiBlast_CBE 68.0731% - - C1 -3B5Z 4.4 MSBA_SALTY
27 PsiBlast_CBE 68.0731% - - C1 -3B5Z 4.3 MSBA_SALTY
9 PsiBlast_PDB 68.0731% - - C1 -3B5Y 4.2 MSBA_SALTY
48 PsiBlast_CBE 56.5841%-148 - C1 -2PMK 7.1
42 PsiBlast_CBE 55.7241%-147 - C1 -2FF7 6.2
54 PsiBlast_CBE 55.7041%-145 - C1 -2FGJ 6.1
60 PsiBlast_CBE 55.6341%-145 - C1 -1XEF 3.2 HLYBP_ECOLX
58 PsiBlast_CBE 54.1341%-146 - C1 -2FFA 6.2
56 PsiBlast_CBE 53.8441%-141 - C1 -2FGJ 6.5 HLYBP_ECOLX
57 PsiBlast_CBE 53.6741%-137 - C1 -2FGJ 3.7 HLYBP_ECOLX
55 PsiBlast_CBE 53.5241%-139 - C1 -2FGJ 3.2 HLYBP_ECOLX
61 PsiBlast_CBE 53.2441%-139 - C1 -1XEF 6.5 HLYBP_ECOLX
51 PsiBlast_CBE 53.1041%-142 - C1 -2FGK 6.4 HLYBP_ECOLX
63 PsiBlast_CBE 52.7841%-145 - C1 -3B5J 6.6
49 PsiBlast_CBE 52.7541%-139 - C1 -2FGK 6.7
59 PsiBlast_CBE 52.2441%-139 - C1 -1XEF 6.3
52 PsiBlast_CBE 52.0341%-138 - C1 -2FGK 3.1 HLYBP_ECOLX
53 PsiBlast_CBE 51.7641%-147 - C1 -2FFB 6.1
50 PsiBlast_CBE 51.6241%-136 - C1 -2FGK 3.1 HLYBP_ECOLX
62 PsiBlast_CBE 51.5541%-140 - C1 -1XEF 3.1 HLYBP_ECOLX
80 PsiBlast_CBE 47.5638%-124 - C1 -2IXG 7.0
73 PsiBlast_CBE 47.0739%-129 - C1 -2IXE 7.3
79 PsiBlast_CBE 44.9638%-122 - C1 -4K8O 6.4
77 PsiBlast_CBE 43.6438%-124 - C1 -2IXF 6.8 TAP1_RAT
74 PsiBlast_CBE 43.5539%-119 - C1 -2IXE 3.4 TAP1_RAT
129 HHSearch 43.2538%-113 - C1 -3NH6 2.2
78 PsiBlast_CBE 42.2538%-121 - C1 -2IXF 3.8 TAP1_RAT
76 PsiBlast_CBE 42.1038%-118 - C1 -2IXF 3.0 TAP1_RAT
75 PsiBlast_CBE 41.4738%-118 - C1 -2IXF 7.0
41 PsiBlast_CBE 40.0042%-111 - C1 -1JJ7 6.0
67 PsiBlast_CBE 39.1434%-114 - C1 -3VX4 4.3 ?
66 PsiBlast_CBE 38.0434%-111 - C1 -3VX4 6.0 ?
99 PsiBlast_CBE 32.4931%-121 - C1 -2PZE 3.6
100 PsiBlast_CBE 32.2931%-125 - C1 -2PZE 4.5 CFTR_HUMAN