@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08630: (2016-06-13 )
MNVLEDKLKQKDIQQFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQFPTVEALADADEEKVLKAWEGLGYYSRVRNLQSAVKEVKQEYGGIVPPDEKDFGGLKGVGPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAIRAFISKEKPSEFNQGLMELGALICTPKSPSCLLCPVQQHCSAFEEGTERELPVKSKKKKPGIKTMAAIVLTDEDGQVYIHKRPSKGLLANLWEFPNLETQKGIKTEREQLIAFLENEYGIQADISDLQGVVEHVFTHLVWNISVFFGKVKQVSDTSKLKKVTKEELEQFAFPVSHQKIWKMAGEAAAISAAP

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADE_A_6(1VRL)
MUTY_GEOSE
[Raw transfer]




ADE_A_3(1MUD)
MUTY_ECOLI
[Raw transfer]




ADE_A_2(1WEI)
MUTY_ECOLI
[Raw transfer]




GOL_A_9(1KG6)
MUTY_ECOLI
[Raw transfer]




GOL_A_6(1KQJ)
MUTY_ECOLI
[Raw transfer]




GOL_A_7(1KG5)
MUTY_ECOLI
[Raw transfer]




GOL_C_6(4YOQ)
MUTY_GEOSE
[Raw transfer]




IMD_A_4(1WEG)
MUTY_ECOLI
[Raw transfer]




IMD_A_4(1MUY)
MUTY_ECOLI
[Raw transfer]




IMD_A_7(1MUN)
MUTY_ECOLI
[Raw transfer]




NACID_B_2(3FSP)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_2(3FSP)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_1(1RRS)
MUTY_GEOSE
[Raw transfer]

-

NACID_C_3(4YPR)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_1(1RRQ)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_2(4YPH)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_1(1VRL)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_2(3G0Q)
MUTY_GEOSE
[Raw transfer]

-

NACID_F_6(4YPR)
MUTY_GEOSE
[Raw transfer]

-

NACID_D_4(4YPR)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_1(1RRQ)
MUTY_GEOSE
[Raw transfer]

-

NACID_B_2(4YOQ)
MUTY_GEOSE
[Raw transfer]

-

EDO_A_3(1WEG)
MUTY_ECOLI
[Raw transfer]




ADE_A_4(1MUD)
MUTY_ECOLI
[Raw transfer]




1 PsiBlast_PDB 98.2157% 0 - C- -5DPK - -
29 HHSearch 90.6056%-102 * C3 *3FSP 10.9 MUTY_GEOSE
9 PsiBlast_PDB 89.5256% -98 - C3 -4YPR 13.6 MUTY_GEOSE
2 PsiBlast_PDB 89.3657%-100 - C3 -3FSP 10.9 MUTY_GEOSE
7 PsiBlast_PDB 89.1657%-102 - C3 -4YPH 13.2 MUTY_GEOSE
51 Fugue 89.1256%-100 - C3 -1RRQ 12.4 MUTY_GEOSE
3 PsiBlast_PDB 87.1557% -97 - C3 -1RRS 10.0 MUTY_GEOSE
5 PsiBlast_PDB 87.1157% -95 - C3 -3G0Q 14.3 MUTY_GEOSE
21 PsiBlast_CBE 86.9856% -90 - C3 -4YPR 14.9 MUTY_GEOSE
4 PsiBlast_PDB 86.9857%-102 - C3 -1VRL 12.8 MUTY_GEOSE
6 PsiBlast_PDB 86.7057% -95 - C3 -4YOQ 12.1 MUTY_GEOSE
8 PsiBlast_PDB 86.4256% -96 - C3 -1RRQ 12.3 MUTY_GEOSE
30 HHSearch 69.5142%-109 - C3 -3N5N - MUTYH_HUMAN -
31 HHSearch 69.1942%-115 - C3 -1KG2 - MUTY_ECOLI -
24 PsiBlast_CBE 68.9838%-103 - C3 -3N5N - MUTYH_HUMAN -
19 PsiBlast_PDB 68.9242%-114 - C3 -1KG7 - MUTY_ECOLI -
10 PsiBlast_PDB 68.4442%-116 - C3 -1KG4 - MUTY_ECOLI -
25 PsiBlast_CBE 68.3938%-104 - C3 -3N5N - MUTYH_HUMAN -
17 PsiBlast_PDB 68.2942%-112 - C3 -1WEF - MUTY_ECOLI -
12 PsiBlast_PDB 67.6242%-115 - C3 -1KG5 2.3 MUTY_ECOLI
20 PsiBlast_PDB 67.4542%-111 - C3 -1MUD 5.4 MUTY_ECOLI
22 PsiBlast_CBE 66.9742%-110 - C3 -1MUN 4.1 MUTY_ECOLI
14 PsiBlast_PDB 66.8542%-112 - C3 -1MUY 3.6 MUTY_ECOLI
11 PsiBlast_PDB 66.4842%-113 - C3 -1WEG 4.0 MUTY_ECOLI
13 PsiBlast_PDB 66.4742%-113 - C3 -1KG6 2.6 MUTY_ECOLI
23 PsiBlast_CBE 66.1442%-103 - C3 -1KQJ 2.9 MUTY_ECOLI
18 PsiBlast_PDB 63.0742%-101 - C3 -1WEI 3.8 MUTY_ECOLI