@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08710: (2016-06-13 )
MHTKSIELHNEALQHIVGGVNSPSRSYKAVGGGSPVAMEKASGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITEAIKKAAENGVLYGTPTKHEVTFAKMLKEAIPAMDKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIANEVITVPFNDIDSYKAALEKWGSEIAAVLVEPIVGNFGIVEPKEGFLEQVNELTHNAGALVIYDEVITAFRFMYGGAQDLLQVKPDLTALGKIIGGGLPIGAYGGKQEIMEQVAPLGPAYQAGTMAGNPASILSGIACLEVLKEKGVYEKLDHLGAMLEEGILKHAETHGITITVNRLKGALTVYFSDEKVENYEQAERSDGETFSTFFKLMLERGINLAPSKYEAWFITTAHTEQDIKDTLTAVEDAFKHLKN

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EA5_A_3(2HP1)
GSA_SYNP6
[Raw transfer]




PMP_A_3(3FQ8)
GSA_SYNP6
[Raw transfer]




PXG_A_3(3FQ7)
GSA_SYNP6
[Raw transfer]




PMP_C_3(3GSB)
GSA_SYNP6
[Raw transfer]




PMP_E_5(3GSB)
GSA_SYNP6
[Raw transfer]




KE4_A_3(2HP2)
GSA_SYNP6
[Raw transfer]




PMP_B_5(3FQA)
GSA_SYNP6
[Raw transfer]




PXG_B_4(3FQ7)
GSA_SYNP6
[Raw transfer]




PMP_A_3(2GSA)
GSA_SYNP6
[Raw transfer]




PMP_A_3(2HOZ)
GSA_SYNP6
[Raw transfer]




IK2_C_18(2YKV)
?
[Raw transfer]




PMP_B_4(2HOZ)
GSA_SYNP6
[Raw transfer]




PLK_C_12(4AO4)
?
[Raw transfer]




PMP_A_2(3BS8)
GSA_BACSU
[Raw transfer]




PMP_B_4(3FQ8)
GSA_SYNP6
[Raw transfer]




PLK_A_4(4AO4)
?
[Raw transfer]




IK2_B_11(2YKV)
?
[Raw transfer]




PLR_A_3(3USF)
GSA_SYNE7
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




IK2_A_4(2YKV)
?
[Raw transfer]




PLK_B_7(4AO4)
?
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




PLP_A_5(2YKY)
?
[Raw transfer]




PMP_B_6(2ZSM)
GSA_AERPE
[Raw transfer]




PMP_C_8(2ZSM)
GSA_AERPE
[Raw transfer]




PLP_B_11(2YKY)
?
[Raw transfer]




PMP_A_2(2ZSL)
GSA_AERPE
[Raw transfer]




PMP_A_2(2EPJ)
GSA_AERPE
[Raw transfer]




PLP_C_21(2YKY)
?
[Raw transfer]




PLR_B_5(3USF)
GSA_SYNE7
[Raw transfer]




PLP_A_5(2YKY)
?
[Raw transfer]




PMP_A_4(2ZSM)
GSA_AERPE
[Raw transfer]




PLR_A_3(2CFB)
GSA_THEEB
[Raw transfer]




PLP_B_4(4GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2HP1)
GSA_SYNP6
[Raw transfer]




PLP_C_11(2YKX)
?
[Raw transfer]




PLP_C_17(2YKU)
?
[Raw transfer]




PLP_A_4(2YKU)
?
[Raw transfer]




PLP_B_10(2YKU)
?
[Raw transfer]




PLP_B_9(2YKX)
?
[Raw transfer]




PLP_B_4(2HP2)
GSA_SYNP6
[Raw transfer]




PLP_A_3(4GSA)
GSA_SYNP6
[Raw transfer]




PLP_A_4(2YKX)
?
[Raw transfer]




PLP_B_4(2EH6)
ARGD_AQUAE
[Raw transfer]




PLP_A_3(2EH6)
ARGD_AQUAE
[Raw transfer]




EDO_B_17(2YKV)
?
[Raw transfer]




HOZ_B_5(2HP2)
GSA_SYNP6
[Raw transfer]




GAB_D_4(3GSB)
GSA_SYNP6
[Raw transfer]




HOZ_A_4(3USF)
GSA_SYNE7
[Raw transfer]




EDO_C_22(2YKV)
?
[Raw transfer]




AKG_B_10(2YKX)
?
[Raw transfer]




4 PsiBlast_PDB 87.3650%-100 - C1 -2HOZ 4.0 GSA_SYNP6
32 PsiBlast_CBE 86.6545%-106 * C1 *5I92 - ? -
15 PsiBlast_PDB 86.4245%-105 - C1 -5I92 - ? -
29 PsiBlast_CBE 85.5950% -95 - C1 -2GSA 3.5 GSA_SYNP6
2 PsiBlast_PDB 85.5850% -94 - C1 -3FQA - GSA_SYNP6 -
5 PsiBlast_PDB 85.4150% -94 - C1 -2HP1 3.8 GSA_SYNP6
9 PsiBlast_PDB 85.0250% -95 - C1 -3GSB 4.4 GSA_SYNP6
10 PsiBlast_PDB 84.9950% -94 - C1 -3FQ7 5.8 GSA_SYNP6
25 PsiBlast_CBE 84.7050% -98 - C1 -2HOZ 3.6 GSA_SYNP6
7 PsiBlast_PDB 84.2150% -90 - C1 -2GSA 4.3 GSA_SYNP6
114 HHSearch 84.0945%-103 - C1 -5I92 - ? -
22 PsiBlast_CBE 84.0750% -93 - C1 -3FQA 4.3 GSA_SYNP6
27 PsiBlast_CBE 84.0550% -94 - C1 -4GSA 3.3 GSA_SYNP6
31 PsiBlast_CBE 84.0050% -93 - C1 -3FQ7 4.1 GSA_SYNP6
21 PsiBlast_CBE 83.9550% -93 - C1 -3FQ8 4.1 GSA_SYNP6
8 PsiBlast_PDB 83.9250% -91 - C1 -4GSA 3.2 GSA_SYNP6
1 PsiBlast_PDB 83.9150% -93 - C1 -3FQ8 - GSA_SYNP6 -
11 PsiBlast_PDB 83.7850% -93 - C1 -3USF 3.7 GSA_SYNE7
128 Fugue 83.7650% -90 - C1 -2GSA - GSA_SYNP6 -
6 PsiBlast_PDB 83.6150% -96 - C1 -2HP2 4.6 GSA_SYNP6
23 PsiBlast_CBE 83.4650% -92 - C1 -2HP2 3.0 GSA_SYNP6
28 PsiBlast_CBE 83.4550% -94 - C1 -3GSB 3.9 GSA_SYNP6
120 HHSearch 83.2651%-101 - C1 -3FQ8 4.8 GSA_SYNP6
14 PsiBlast_PDB 82.3549% -96 - C1 -2E7U 3.8 GSA_THET8
30 PsiBlast_CBE 81.5950%-103 - C1 -3USF 3.9 GSA_SYNE7
13 PsiBlast_PDB 80.0650%-110 - C1 -2CFB 3.0 GSA_THEEB
34 PsiBlast_CBE 79.9038%-107 - C1 -2ZSM 3.9 GSA_AERPE
12 PsiBlast_PDB 79.6548% -88 - C1 -3BS8 4.0 GSA_BACSU
33 PsiBlast_CBE 79.4538%-105 - C1 -2ZSM 4.1 GSA_AERPE
123 HHSearch 79.3347% -93 - C1 -2E7U 3.8 GSA_THET8
24 PsiBlast_CBE 79.0150% -99 - C1 -2HP1 3.8 GSA_SYNP6
18 PsiBlast_PDB 79.0138%-104 - C1 -2ZSM 4.0 GSA_AERPE
17 PsiBlast_PDB 78.3138%-104 - C1 -2ZSL 4.5 GSA_AERPE
16 PsiBlast_PDB 78.2038%-104 - C1 -2EPJ 4.4 GSA_AERPE
107 HHSearch 66.6630%-100 - C1 -2YKY 4.2 ?
43 PsiBlast_CBE 63.7632%-101 - C1 -4AO4 5.0 ?
56 PsiBlast_CBE 63.1932%-100 - C1 -2YKU 3.1 ?
50 PsiBlast_CBE 62.6632%-100 - C1 -2YKX 3.1 ?
46 PsiBlast_CBE 62.3832%-100 - C1 -2YKY 4.4 ?
45 PsiBlast_CBE 62.3832%-100 - C1 -4AO4 5.2 ?
48 PsiBlast_CBE 62.3232% -99 - C1 -2YKY 4.1 ?
49 PsiBlast_CBE 62.2132% -98 - C1 -2YKX 3.2 ?
47 PsiBlast_CBE 62.1732%-100 - C1 -2YKY 4.2 ?
57 PsiBlast_CBE 62.1432% -98 - C1 -2YKU 4.3 ?
54 PsiBlast_CBE 62.0432%-100 - C1 -2YKV 4.2 ?
52 PsiBlast_CBE 62.0332% -99 - C1 -2YKV 3.9 ?
51 PsiBlast_CBE 62.0032% -99 - C1 -2YKX 3.2 ?
53 PsiBlast_CBE 61.4932% -98 - C1 -2YKV 4.3 ?
55 PsiBlast_CBE 61.4532% -98 - C1 -2YKU 2.9 ?
44 PsiBlast_CBE 61.2132%-100 - C1 -4AO4 5.2 ?
76 PsiBlast_CBE 35.0431% -89 - C1 -2EH6 2.7 ARGD_AQUAE
77 PsiBlast_CBE 32.9431% -87 - C1 -2EH6 3.2 ARGD_AQUAE