@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08820: (2016-06-13 )
MSSNKLTTSWGAPVGDNQNSMTAGSRGPTLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESLHQVTILMSDRGIPATLRHMHGFGSHTFKWTNAEGEGVWIKYHFKTEQGVKNLDVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYVQIMPLEDANTYRFDPFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYRLMSEDERTRLVENIVNAMKPVEKEEIKLRQIEHFYKADPEYGKRVAEGLGLPIKKDS

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_4(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]




HEM_A_2(3HB6)
CATA_PROMI
[Raw transfer]




HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]




FMT_B_7(1QWM)
CATA_HELPY
[Raw transfer]




FMT_A_6(1QWM)
CATA_HELPY
[Raw transfer]




22 PsiBlast_CBE 87.6367% -33 - C5 -1SI8 - ? -
21 PsiBlast_CBE 87.5467% -33 - C5 -1SI8 - ? -
23 PsiBlast_CBE 87.2467% -33 - C5 -1SI8 - ? -
1 PsiBlast_PDB 87.1767% -32 - C5 -1SI8 - ? -
75 PsiBlast_CBE 86.7757% -36 - C5 -1QWM 13.0 CATA_HELPY
14 PsiBlast_PDB 86.6557% -43 - C5 -3RE8 - CATA_BOVIN -
103 HHSearch 86.4557% -41 - C5 -1DGF - CATA_HUMAN -
112 HHSearch 86.4467% -31 - C5 -1SI8 - ? -
18 PsiBlast_PDB 86.4056% -42 - C5 -1DGF - CATA_HUMAN -
78 PsiBlast_CBE 86.3357% -34 - C5 -1QWL 13.0 CATA_HELPY
76 PsiBlast_CBE 86.2357% -37 - C5 -1QWM 13.0 CATA_HELPY
12 PsiBlast_PDB 85.9857% -43 - C5 -3RGP - CATA_BOVIN -
66 PsiBlast_CBE 85.9756% -42 - C5 -1DGG - CATA_HUMAN -
25 PsiBlast_CBE 85.9757% -41 - C5 -3J7B - CATA_BOVIN -
77 PsiBlast_CBE 85.9357% -35 - C5 -1QWL 12.9 CATA_HELPY
72 PsiBlast_CBE 85.8856% -40 - C5 -1DGB - CATA_HUMAN -
67 PsiBlast_CBE 85.7556% -42 - C5 -1DGG - CATA_HUMAN -
29 PsiBlast_CBE 85.7457% -42 - C5 -3NWL - CATA_BOVIN -
61 PsiBlast_CBE 85.6557% -42 - C5 -1QQW - CATA_HUMAN -
63 PsiBlast_CBE 85.6257% -44 - C5 -1F4J - CATA_HUMAN -
34 PsiBlast_CBE 85.5057% -43 - C5 -7CAT 11.9 CATA_BOVIN
104 HHSearch 85.4458% -30 - C5 -1QWL 13.0 CATA_HELPY
5 PsiBlast_PDB 85.2357% -43 - C5 -7CAT 11.9 CATA_BOVIN
33 PsiBlast_CBE 84.6057% -38 - C5 -8CAT 12.1 CATA_BOVIN
6 PsiBlast_PDB 84.3257% -40 - C5 -8CAT 11.8 CATA_BOVIN
79 PsiBlast_CBE 81.5853% -36 - C5 -3HB6 13.2 CATA_PROMI
102 HHSearch 79.4151% -29 - C5 -1GWE 12.8 CATA_MICLU