@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08830: (2016-06-13 )
MAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNIAADLNLKDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLGNELAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSEFEKTEDLEYAEGSGI

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




23 PsiBlast_CBE 83.3137%-137 - C1 -4KI0 - MALK_ECOLI -
16 PsiBlast_PDB 83.3137%-136 - C1 -3PUW - MALK_ECOLI -
15 PsiBlast_PDB 82.3737%-140 - C1 -3PUV - MALK_ECOLI -
18 PsiBlast_PDB 81.8837%-139 - C1 -3RLF - MALK_ECOLI -
12 PsiBlast_PDB 81.6537%-136 - C1 -3PUY - MALK_ECOLI -
31 PsiBlast_CBE 80.7137%-134 - C1 -2AWN - MALK_ECOLI -
24 PsiBlast_CBE 80.4037%-132 - C1 -3RLF - MALK_ECOLI -
25 PsiBlast_CBE 80.3137%-138 - C1 -3PUZ - MALK_ECOLI -
17 PsiBlast_PDB 80.2237%-137 - C1 -3PUX - MALK_ECOLI -
132 Fugue 80.1531%-142 - C1 -3TUZ - METN_ECOLI -
117 HHSearch 79.8936%-137 - C1 -3RLF - MALK_ECOLI -
27 PsiBlast_CBE 79.8737%-131 - C1 -3PUX - MALK_ECOLI -
28 PsiBlast_CBE 79.2737%-131 - C1 -3PUW - MALK_ECOLI -
35 PsiBlast_CBE 79.1837%-135 - C1 -2R6G - MALK_ECOLI (first) -
14 PsiBlast_PDB 79.1437%-132 - C1 -3PV0 - MALK_ECOLI -
115 HHSearch 78.6937%-124 - C1 -3FVQ 7.0 FBPC_NEIG1
118 HHSearch 78.6136%-131 - C1 -3TUI - METN_ECOLI -
36 PsiBlast_CBE 78.0337%-131 - C1 -2R6G - MALK_ECOLI (first) -
29 PsiBlast_CBE 78.0337%-129 - C1 -3PUV - MALK_ECOLI -
22 PsiBlast_CBE 77.9337%-131 - C1 -4KI0 - MALK_ECOLI -
64 PsiBlast_CBE 71.6037%-117 - C1 -4U00 4.4 ?
78 PsiBlast_CBE 64.3036%-138 - C1 -2OLK 4.4 ?
83 PsiBlast_CBE 63.9836%-142 - C1 -2OLJ 4.2 ?
80 PsiBlast_CBE 62.1236%-137 - C1 -2OLK 4.1 ?
79 PsiBlast_CBE 61.0736%-139 - C1 -2OLK 4.6 ?
70 PsiBlast_CBE 61.0736%-138 - C1 -3C4J 3.7 ?
84 PsiBlast_CBE 60.2136%-135 - C1 -3C41 3.8 ?
82 PsiBlast_CBE 60.1636%-134 - C1 -2OLJ 3.7 ?
97 PsiBlast_CBE 60.1335%-136 - C1 -4MKI 2.0 ECFA2_CALS4
73 PsiBlast_CBE 59.9036%-135 - C1 -2Q0H 3.5 ?
81 PsiBlast_CBE 59.8336%-143 - C1 -2OLK 4.1 ?
96 PsiBlast_CBE 59.7835%-135 - C1 -4MKI 2.1 ECFA2_CALS4
72 PsiBlast_CBE 58.7936%-137 - C1 -2Q0H 4.2 ?
71 PsiBlast_CBE 57.7536%-132 - C1 -3C4J 4.9 ?
85 PsiBlast_CBE 56.6736%-129 - C1 -3C41 5.0 ?
69 PsiBlast_CBE 47.5635%-107 - C1 -1L2T 4.3 Y796_METJA
68 PsiBlast_CBE 46.8335%-107 - C1 -1L2T 4.6 Y796_METJA
90 PsiBlast_CBE 45.9034%-115 - C1 -3TIF 4.3 Y796_METJA
91 PsiBlast_CBE 44.6334%-109 - C1 -3TIF 4.3 Y796_METJA