@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09070: (2016-06-14 )
MEIKLEHVSKKYGRHTAVNDVSITLSSGRIYGLIGPNGSGKSTTLKMMAGLLFPTSGFVKVDEEQVTREMVRQTAYLTELDMFYPHFTVKDMVNFYQSQFPDFHTEQVYKLLNEMQLNPEKKIKKLSKGNRGRLKIVLALARRADVILLDEPFSGLDPMVRDSIVNSLVSYIDFEQQIVVIATHEIDEIETLLDEVIILANGEKVAQREVEDIREQEGMSVLQWFKSKMEVC

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_C_3(1VCI)
?
[Raw transfer]




ADP_A_3(4YER)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




51 Fugue 88.7031%-115 - C1 -1Z47 - ? -
9 PsiBlast_PDB 88.2029%-141 - C1 -3TUZ - METN_ECOLI -
16 PsiBlast_PDB 86.1529%-140 - C1 -3TUJ - METN_ECOLI -
37 HHSearch 86.0630%-136 - C1 -3TUI - METN_ECOLI -
38 HHSearch 85.6428%-127 - C1 -4HUQ - ECFA2_LACBA -
8 PsiBlast_PDB 85.2629%-134 - C1 -3TUI - METN_ECOLI -
49 Fugue 84.8428%-138 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 84.4829%-128 - C1 -4WBS - ? -
5 PsiBlast_PDB 83.7630%-136 - C1 -3DHW - METN_ECOLI -
35 HHSearch 83.6127%-124 - C1 -3RLF - MALK_ECOLI -
26 HHSearch 82.9631%-112 - C1 -1Z47 - ? -
28 HHSearch 81.5129%-124 - C1 -4YER 6.3 ?
10 PsiBlast_PDB 80.6727%-146 - C1 -4RVC - ? -
29 HHSearch 79.6830%-114 - C1 -2IT1 - ? -
21 PsiBlast_CBE 79.1733%-119 - C1 -2IT1 - ? -
34 HHSearch 78.3027%-119 - C1 -2YYZ - ? -
32 HHSearch 78.1425%-119 - C1 -3FVQ - FBPC_NEIG1 -
36 HHSearch 77.8325%-125 * C1 *1OXX - ? -
12 PsiBlast_PDB 76.9629%-132 - C1 -4TQV - ? -
6 PsiBlast_PDB 76.7532%-116 - C1 -1Z47 - ? -
7 PsiBlast_PDB 71.9531%-111 - C1 -2D62 3.1 ?