@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09100: (2016-06-14 )
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANVTKEA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]

-

TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_B_6(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




CHAIN_S_4(3PF5)
CSPB_BACSU
[Raw transfer]

-

NACID_U_3(3TS2)
LN28A_MOUSE
[Raw transfer]

-

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]

-

CHAIN_R_3(3PF5)
CSPB_BACSU
[Raw transfer]

-

NACID_B_1(2ES2)
CSPB_BACSU
[Raw transfer]

-

21 PsiBlast_CBE 90.99100%-111 - C4 -3PF5 7.0 CSPB_BACSU
3 PsiBlast_PDB 90.16100% -98 - C4 -1CSP - CSPB_BACSU -
1 PsiBlast_PDB 90.16100%-126 - C4 -2ES2 9.6 CSPB_BACSU
10 PsiBlast_PDB 89.3296%-122 - C4 -2I5L - CSPB_BACSU -
22 PsiBlast_CBE 89.25100%-112 - C4 -3PF4 7.1 CSPB_BACSU
8 PsiBlast_PDB 88.31100%-116 - C4 -3PF5 2.8 CSPB_BACSU
9 PsiBlast_PDB 87.4297%-127 - C4 -2I5M - CSPB_BACSU -
7 PsiBlast_PDB 87.40100%-117 - C4 -3PF4 Error CSPB_BACSU
4 PsiBlast_PDB 86.85100%-111 - C4 -1CSQ - CSPB_BACSU -
14 PsiBlast_PDB 86.0686%-129 - C4 -1I5F - CSPB_BACCL -
53 HHSearch 85.1083%-127 - C4 -1C9O 2.1 CSPB_BACCL
16 PsiBlast_PDB 84.9284%-132 - C4 -1C9O 2.1 CSPB_BACCL
12 PsiBlast_PDB 83.1487%-112 - C4 -1HZC - CSPB_BACCL -
2 PsiBlast_PDB 83.08100%-116 - C4 -2F52 - CSPB_BACSU -
25 PsiBlast_CBE 82.1284%-126 - C4 -1C9O 2.1 CSPB_BACCL
13 PsiBlast_PDB 81.1286%-125 - C- -1HZ9 - CSPB_BACCL -
11 PsiBlast_PDB 80.1686%-107 - C- -1HZA - CSPB_BACCL -
15 PsiBlast_PDB 80.0484%-117 - C4 -1HZB - CSPB_BACCL -
23 PsiBlast_CBE 79.8684%-107 - C4 -1HZB - CSPB_BACCL -
6 PsiBlast_PDB 77.59100% -79 - C4 -1NMG - CSPB_BACSU -
71 HHSearch 67.0342%-125 * C4 *3TS2 11.9 LN28A_MOUSE