@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09190: (2016-06-14 )
MLSVEMISRQNRCHYVYKGGNMMRRILHIVLITALMFLNVMYTFEAVKAAEPQQPISIEKAIQQKEGQALVEGYAVGQAVSPQHYKLTSPFSNDYNVALADRKNKTSPEHILPVQIPSAFRSQFGLQTNPLLLGKKITVQGKLENYFNTTGLKNVQSMNVTDDTKTPPAEQQVTINEARGRLNEEVTIKGIITADQNAIGGGKLSTFLQDETGGINIYSPSPEQFPELKEGMDVTVTGKITSYQGLKEIVPNSSGIKINQSNQSLPAPKHLTINELINGSLGDQYEGRLVKLTAFVSSIPSSPAGGGYNVTMIDDDHHAMTLRVMNETGVINELDEGKWYEFTGVLSRYQTFQLLPRKSADLKLLEEQPAPPSAEGEYEGIVDRVVDGDTIHLKSPVLGTTKIRFVNVDAPETYHTPKNDADENQLRFGKKASDYLKTVLSPGDKITVKVGSEAKDSYGRLLGQVITESGSNVNLELVKNGYAPTYFIWPVDNEEDYQQFQAAVAAAKKDQKGIWNENDPLMEMPFEFRAREQGKGLTRYVGDSSNKTYVQPADWKKIAVENRIFFASASEAESAGYKKRQTAPQEHVPLRILSMNDLHGKIDQQYELDLDGNGTVDGTFGRMDYAAAYLKEKKAEKKNSLIVHAGDMIGGSSPVSSLLQDEPTVELMEDIGFDVGTVGNHEFDEGTDELLRILNGGDHPKGTSGYDGQNFPLVCANCKMKSTGEPFLPAYDIINVEGVPVAFIGVVTQSAAGMVMPEGIKNIEFTDEATAVNKAAEELKKKGVKAIAVLAHMSAEQNGNAITGESADLANKTDSEIDVIFAAHNHQVVNGEVNGKLIVQAFEYGKAIGVVDVEIDKTTKDIVKKSAEIVYVDQSKIEPDVSASAILKKYETIAEPIISEVVGEAAVDMEGGYSNDGDTPLGNLIADGMRAAMKTDFALMNGGGIREALKKGPITWGDLYNIQPFGNVLTKLEIKGKDLREIINAQISPVFGPDYSISGFTYTWDKETGKAVDMKMADGTEIQPDATYTLTVNNFMATATGAKYQPIGLLGKNPVTGPEDLEATVEYVKSFDEPIAYTKEGRIKLAEASDIEDPVTEDPITEEPGDDPGTEDPIKEDPRPGEDLPDIKETPGTAPVHQLPPSAISRFNEIPINNTKTADTANSISTLPLQTETAESGSDHQLPDTSAGYYNFMVIGAAVTLSGTYLYVRRKRSASRT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URI_A_5(3IVD)
?
[Raw transfer]



ADN_A_9(1HO5)
USHA_ECOLI
[Raw transfer]



THM_A_5(2Z1A)
?
[Raw transfer]



FMT_A_9(3C9F)
?
[Raw transfer]
42 HHSearch 88.0225% -92 - C1 -4H2G - 5NTD_HUMAN -
43 HHSearch 87.7129% -90 - C1 -2Z1A - ? -
1 PsiBlast_PDB 84.2728% -84 - C1 -2Z1A 3.5 ?
15 PsiBlast_PDB 81.6123% -81 - C1 -4H2F - 5NTD_HUMAN -
16 PsiBlast_PDB 81.0723% -81 - C1 -4H2G - 5NTD_HUMAN -
47 HHSearch 80.7520% -98 - C1 -4Q7F - ? -
14 PsiBlast_PDB 80.4523% -78 - C1 -4H2I - 5NTD_HUMAN -
44 HHSearch 80.3326% -73 - C1 -1HP1 - USHA_ECOLI -
19 PsiBlast_PDB 78.2122% -78 - C1 -4H2B - 5NTD_HUMAN -
18 PsiBlast_PDB 77.3722% -78 - C1 -4H1Y - 5NTD_HUMAN -
48 HHSearch 77.0419% -98 - C1 -2WDC - ? -
8 PsiBlast_PDB 76.2927% -77 - C1 -1OID - USHA_ECOLI -
9 PsiBlast_PDB 76.2527% -79 - C1 -1OIE - USHA_ECOLI -
17 PsiBlast_PDB 76.2023% -74 - C1 -4H1S - 5NTD_HUMAN -
7 PsiBlast_PDB 76.1227% -78 - C1 -4WWL - USHA_ECOLI -
64 Fugue 74.4723% -66 - C1 -3ZTV - 5NTD_HAEIN -
45 HHSearch 74.4724% -66 - C1 -3IVE - ? -
10 PsiBlast_PDB 74.1327% -75 - C1 -1OI8 - USHA_ECOLI -
2 PsiBlast_PDB 73.6927% -75 - C1 -1HP1 - USHA_ECOLI -
4 PsiBlast_PDB 73.2127% -73 - C1 -1HPU - USHA_ECOLI -