@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09290: (2016-06-14 )
METYILSLDQGTTSSRAILFNKEGKIVHSAQKEFTQYFPHPGWVEHNANEIWGSVLAVIASVISESGISASQIAGIGITNQRETTVVWDKDTGSPVYNAIVWQSRQTSGICEELREKGYNDKFREKTGLLIDPYFSGTKVKWILDNVEGAREKAEKGELLFGTIDTWLIWKMSGGKAHVTDYSNASRTLMFNIYDLKWDDELLDILGVPKSMLPEVKPSSHVYAETVDYHFFGKNIPIAGAAGDQQSALFGQACFEEGMGKNTYGTGCFMLMNTGEKAIKSEHGLLTTIAWGIDGKVNYALEGSIFVAGSAIQWLRDGLRMFQDSSLSESYAEKVDSTDGVYVVPAFVGLGTPYWDSDVRGSVFGLTRGTTKEHFIRATLESLAYQTKDVLDAMEADSNISLKTLRVDGGAVKNNFLMQFQGDLLNVPVERPEINETTALGAAYLAGIAVGFWKDRSEIANQWNLDKRFEPELEEEKRNELYKGWQKAVKAAMAFK

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_G_9(1GLB)
GLPK_ECOLI
[Raw transfer]




ATS_Y_4(1GLJ)
GLPK_ECOLI
[Raw transfer]




ATF_Y_5(1BWF)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLE)
GLPK_ECOLI
[Raw transfer]




ADP_G_5(1GLD)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLC)
GLPK_ECOLI
[Raw transfer]




ATS_O_5(1GLJ)
GLPK_ECOLI
[Raw transfer]




ACP_Y_5(1GLL)
GLPK_ECOLI
[Raw transfer]




ACP_O_6(1GLL)
GLPK_ECOLI
[Raw transfer]




ATF_O_6(1BWF)
GLPK_ECOLI
[Raw transfer]




GOL_X_5(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_X_4(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_X_3(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_O_7(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_O_8(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_X_4(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_O_3(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_X_3(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_G_9(1GLA)
GLPK_ECOLI
[Raw transfer]




GOL_I_9(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_O_3(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_Z_5(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_G_7(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_O_4(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_D_4(1XUP)
GLPK_ENTCA
[Raw transfer]




GOL_C_3(1XUP)
GLPK_ENTCA
[Raw transfer]




EDO_O_10(3H3N)
GLPK_ENTCA
[Raw transfer]




EDO_B_21(2W41)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




EDO_A_9(2W41)
?
[Raw transfer]




EDO_B_25(2W41)
?
[Raw transfer]




MPD_D_4(2D4W)
?
[Raw transfer]




89 HHSearch 89.2274% -71 - C3 -3G25 - GLPK_STAAC -
1 PsiBlast_PDB 88.8072% -71 - C3 -3G25 - GLPK_STAAC -
2 PsiBlast_PDB 88.6772% -70 - C3 -3GE1 - GLPK_STAAC -
29 PsiBlast_CBE 87.1462% -82 - C3 -3EZW - GLPK_ECOLI -
44 PsiBlast_CBE 86.3963% -68 - C3 -3H3N 3.5 GLPK_ENTCA
14 PsiBlast_PDB 86.3963% -68 - C3 -3FLC 3.5 GLPK_ENTCA
30 PsiBlast_CBE 86.3362% -78 - C3 -3EZW - GLPK_ECOLI -
38 PsiBlast_CBE 86.1963% -69 - C3 -3H45 - GLPK_ENTCA -
37 PsiBlast_CBE 86.1563% -68 - C3 -3H46 3.6 GLPK_ENTCA
41 PsiBlast_CBE 86.0963% -70 - C3 -3H3O - GLPK_ENTCA -
43 PsiBlast_CBE 86.0463% -69 - C3 -3H3O - GLPK_ENTCA -
40 PsiBlast_CBE 85.8063% -68 - C3 -3H45 - GLPK_ENTCA -
49 PsiBlast_CBE 85.6162% -80 - C3 -1GLJ 7.0 GLPK_ECOLI
32 PsiBlast_CBE 85.2862% -77 - C3 -3EZW - GLPK_ECOLI -
16 PsiBlast_PDB 85.2863% -66 - C3 -3H46 3.7 GLPK_ENTCA
45 PsiBlast_CBE 85.1263% -68 - C3 -3D7E 3.3 GLPK_ENTCA
47 PsiBlast_CBE 85.1162% -80 - C3 -1GLL 5.2 GLPK_ECOLI
35 PsiBlast_CBE 85.0662% -76 - C3 -3EZW - GLPK_ECOLI -
26 PsiBlast_CBE 85.0662% -75 - C3 -1BU6 - GLPK_ECOLI -
88 HHSearch 85.0563% -68 - C3 -3H3N 3.4 GLPK_ENTCA
17 PsiBlast_PDB 84.9363% -68 - C3 -3H3N 3.4 GLPK_ENTCA
36 PsiBlast_CBE 84.7563% -63 - C3 -3FLC 3.6 GLPK_ENTCA
50 PsiBlast_CBE 84.6662% -78 - C3 -1BWF 5.6 GLPK_ECOLI
19 PsiBlast_PDB 84.5363% -70 - C3 -3D7E 3.6 GLPK_ENTCA
48 PsiBlast_CBE 84.4362% -77 - C3 -1GLJ 6.4 GLPK_ECOLI
24 PsiBlast_CBE 83.4062% -75 - C3 -1BOT 4.6 GLPK_ECOLI
25 PsiBlast_CBE 83.2262% -74 - C3 -1BO5 2.7 GLPK_ECOLI
54 PsiBlast_CBE 83.1852% -80 - C3 -2D4W 3.9 ?
4 PsiBlast_PDB 82.7462% -74 - C3 -1GLA 2.4 GLPK_ECOLI
92 HHSearch 82.6653% -78 - C3 -2D4W 3.9 ?
7 PsiBlast_PDB 82.6262% -74 - C3 -1GLD 5.4 GLPK_ECOLI
8 PsiBlast_PDB 82.4562% -74 - C3 -1GLE 5.3 GLPK_ECOLI
20 PsiBlast_PDB 82.3962% -73 - C3 -1BWF 5.9 GLPK_ECOLI
6 PsiBlast_PDB 82.3462% -73 - C3 -1GLC 5.2 GLPK_ECOLI
11 PsiBlast_PDB 82.3062% -73 - C3 -1BO5 4.1 GLPK_ECOLI
46 PsiBlast_CBE 82.0362% -74 - C3 -1GLL 4.9 GLPK_ECOLI
10 PsiBlast_PDB 81.9062% -74 - C3 -1BOT 4.1 GLPK_ECOLI
53 PsiBlast_CBE 81.3152% -77 - C3 -2D4W 3.2 ?
67 PsiBlast_CBE 75.2341% -90 - C3 -2W41 2.9 ?
5 PsiBlast_PDB 74.8362% -77 - C3 -1GLB 6.5 GLPK_ECOLI
68 PsiBlast_CBE 74.7241% -88 - C3 -2W41 3.1 ?
52 PsiBlast_CBE 67.7264% -55 - C3 -1XUP 2.5 GLPK_ENTCA
51 PsiBlast_CBE 67.6464% -51 - C3 -1XUP 3.1 GLPK_ENTCA