@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09450: (2016-06-14 )
MNPMDRQTEGQEPQHQDRQPGIESKMNPLPLSEDEDYRGSGKLKGKVAIITGGDSGIGRAAAIAFAKEGADISILYLDEHSDAEETRKRIEKENVRCLLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQEGCAIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPLIPATFPEEKVKQHGLDTPMGRPGQPVEHAGAYVLLASDESSYMTGQTIHVNGGRFIST

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(3R3S)
?
[Raw transfer]




NAD_C_12(3R3S)
?
[Raw transfer]




NAD_A_5(3R3S)
?
[Raw transfer]




NAD_D_15(3R3S)
?
[Raw transfer]




FMT_D_16(3R3S)
?
[Raw transfer]




FMT_C_13(3R3S)
?
[Raw transfer]




EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]




EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]




PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]




1 PsiBlast_PDB 78.0565% -58 - C1 -3I3O - ? -
2 PsiBlast_PDB 76.9165% -57 - C1 -3IJR - ? -
26 PsiBlast_CBE 76.7765% -56 - C1 -3I3O - ? -
24 PsiBlast_CBE 76.4165% -56 - C1 -3I3O - ? -
27 PsiBlast_CBE 75.7865% -58 - C1 -3I3O - ? -
25 PsiBlast_CBE 74.2165% -56 - C1 -3I3O - ? -
23 PsiBlast_CBE 74.0965% -62 - C1 -3I3O - ? -
21 PsiBlast_CBE 72.1965% -58 - C1 -3I3O - ? -
30 PsiBlast_CBE 68.0144% -56 - C1 -3R3S 11.4 ?
29 PsiBlast_CBE 67.8044% -55 - C1 -3R3S 11.5 ?
28 PsiBlast_CBE 67.0544% -53 - C1 -3R3S 11.0 ?
3 PsiBlast_PDB 66.9244% -54 - C1 -3R3S 11.2 ?
77 PsiBlast_CBE 64.9734%-101 - C1 -3TZK - ? -
94 PsiBlast_CBE 61.7033% -92 - C1 -3RSH - FABG_VIBCH -
125 HHSearch 61.6632% -91 - C1 -3ICC - ? -
38 PsiBlast_CBE 61.4736% -94 - C1 -4MOW - ? -
76 PsiBlast_CBE 61.3034% -96 - C1 -3TZK - ? -
83 PsiBlast_CBE 61.0933% -95 - C1 -3TZH - ? -
96 PsiBlast_CBE 60.5833% -89 - C1 -3RRO 2.6 FABG_VIBCH
78 PsiBlast_CBE 60.5433% -94 - C1 -3TZH - ? -
95 PsiBlast_CBE 58.7433% -92 - C1 -3RRO 2.6 FABG_VIBCH
6 PsiBlast_PDB 51.7636% -78 - C1 -3OSU 2.7 FABG_STAAM