@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10120: (2016-06-15 )
MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CP3_A_2(2Q71)
DCUP_HUMAN
[Raw transfer]




CP3_A_2(1R3W)
DCUP_HUMAN
[Raw transfer]




1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]




1CP_A_2(1R3Q)
DCUP_HUMAN
[Raw transfer]




CP3_A_2(1R3Y)
DCUP_HUMAN
[Raw transfer]




1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]




1CP_A_2(1R3V)
DCUP_HUMAN
[Raw transfer]




CP3_A_2(1R3T)
DCUP_HUMAN
[Raw transfer]




EDO_B_10(4ZR8)
?
[Raw transfer]




EDO_A_5(4ZR8)
?
[Raw transfer]




EDO_A_5(4ZR8)
?
[Raw transfer]




1 PsiBlast_PDB 91.8199%-123 - C2 -2INF - DCUP_BACSU -
27 HHSearch 89.5794%-127 - C2 -2INF - DCUP_BACSU -
4 PsiBlast_PDB 79.4741%-138 - C2 -2EJA - DCUP_AQUAE -
24 PsiBlast_CBE 78.0937%-130 - C2 -1R3S 10.5 DCUP_HUMAN
18 PsiBlast_PDB 77.7637%-128 - C2 -1R3W 9.9 DCUP_HUMAN
14 PsiBlast_PDB 77.6937%-129 - C2 -3GW3 - DCUP_HUMAN -
9 PsiBlast_PDB 77.4237%-127 - C2 -1R3Q 9.2 DCUP_HUMAN
20 PsiBlast_PDB 77.0537%-127 - C2 -1R3V 6.8 DCUP_HUMAN
23 PsiBlast_CBE 77.0037%-128 - C2 -1R3T 8.5 DCUP_HUMAN
11 PsiBlast_PDB 76.8837%-127 - C2 -3GVQ - DCUP_HUMAN -
10 PsiBlast_PDB 76.7637%-128 - C2 -1R3Y 9.7 DCUP_HUMAN
8 PsiBlast_PDB 76.6637%-128 - C2 -1URO - DCUP_HUMAN -
48 Fugue 76.4436%-119 - C2 -1URO - DCUP_HUMAN -
25 PsiBlast_CBE 76.4437%-129 - C2 -2Q71 11.3 DCUP_HUMAN
34 HHSearch 76.4039%-146 - C2 -2EJA - DCUP_AQUAE -
13 PsiBlast_PDB 76.1737%-125 - C2 -1JPI - DCUP_HUMAN -
28 HHSearch 76.0136%-128 - C2 -1R3S 10.3 DCUP_HUMAN
7 PsiBlast_PDB 75.8137%-125 - C2 -3GW0 - DCUP_HUMAN -
49 Fugue 75.6436%-120 - C2 -1URO - DCUP_HUMAN -
15 PsiBlast_PDB 75.3837%-123 - C2 -1JPH - DCUP_HUMAN -
6 PsiBlast_PDB 73.4239%-121 - C2 -4ZR8 2.9 ?
22 PsiBlast_CBE 69.2139%-115 - C2 -4ZR8 2.0 ?
32 HHSearch 68.7936%-117 * C2 *4ZR8 2.9 ?