@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10220: (2016-06-16 )
MKRIKFGLATQIFVGLILGVIVGVIWYGNPALPTYLQPIGDLFLRLIKMIVIPIVVSSLIIGVAGAGNGKQVGKLGFRTILYFEIITTFAIILGLALANIFHPGTGVNIHEAQKSDISQYVETEKEQSNKSVAETFLHIVPTNFFQSLVEGDLLAIICFTVLFALGISAIGERGKPVLAFFEGVSHAMFHVVNLVMKVAPFGVFALIGVTVSKFGLGSLISLGKLVGLVYVALAFFLIVIFGIVAKIAGISIFKFLAYMKDEILLAFSTSSSETVLPRIMEKMEKIGCPKGIVSFVIPIGYTFNLDGSVLYQSIAALFLAQVYGIDLTIWHQITLVLVLMVTSKGMAAVPGTSFVVLLATLGTIGVPAEGLAFIAGVDRIMDMARTVVNLTGNALAAVVMSKWEGMFNPAKAETVMSQSKTEQNATISG

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TB1_F_6(2NWW)
?
[Raw transfer]



TB1_E_5(2NWW)
?
[Raw transfer]



ASP_B_8(3V8F)
?
[Raw transfer]



TB1_D_4(2NWW)
?
[Raw transfer]



ASP_C_12(3V8F)
?
[Raw transfer]



ASP_C_14(4IZM)
?
[Raw transfer]



ASP_A_6(4IZM)
?
[Raw transfer]



ASP_B_10(4IZM)
?
[Raw transfer]



ASP_A_4(4X2S)
?
[Raw transfer]



ASP_C_10(4X2S)
?
[Raw transfer]



ASP_B_7(4X2S)
?
[Raw transfer]



ASP_B_5(3KBC)
?
[Raw transfer]



ASP_A_4(3KBC)
?
[Raw transfer]



ASP_C_6(3KBC)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]
38 PsiBlast_CBE 86.5835%-187 - C11 -4P1A - ? -
36 PsiBlast_CBE 85.9835%-188 - C11 -4P3J - ? -
7 PsiBlast_PDB 85.9535%-191 - C11 -4P19 - ? -
44 PsiBlast_CBE 85.8235%-188 - C11 -3V8G - ? -
1 PsiBlast_PDB 85.7135%-185 - C11 -3V8F - ? -
39 PsiBlast_CBE 85.6035%-187 - C11 -4P1A - ? -
9 PsiBlast_PDB 85.5635%-187 - C11 -4P3J - ? -
40 PsiBlast_CBE 85.5435%-186 - C11 -4P19 - ? -
8 PsiBlast_PDB 85.5435%-187 - C11 -4P1A - ? -
21 PsiBlast_CBE 85.5135%-185 - C11 -3V8F 2.9 ?
46 PsiBlast_CBE 85.3935%-190 - C11 -3V8G - ? -
49 PsiBlast_CBE 85.1835%-187 - C11 -3KBC 1.8 ?
11 PsiBlast_PDB 85.1635%-188 - C11 -3V8G - ? -
32 PsiBlast_CBE 85.1435%-177 - C11 -2NWW 3.7 ?
37 PsiBlast_CBE 85.0835%-189 - C11 -4P3J - ? -
43 PsiBlast_CBE 84.9235%-190 - C11 -3V8G - ? -
50 PsiBlast_CBE 84.8135%-187 - C11 -3KBC 1.8 ?
41 PsiBlast_CBE 84.7235%-189 - C11 -4P19 - ? -
65 HHSearch 84.6737%-180 * C11 *2NWL 2.6 ?
14 PsiBlast_PDB 84.5335%-181 - C11 -4OYE - ? -
22 PsiBlast_CBE 84.5235%-182 - C11 -3V8F 3.0 ?
4 PsiBlast_PDB 84.5035%-180 - C11 -2NWW 3.3 ?
33 PsiBlast_CBE 84.3835%-175 - C11 -2NWW 2.8 ?
13 PsiBlast_PDB 83.8135%-186 - C11 -3KBC 1.9 ?
2 PsiBlast_PDB 83.5635%-189 - C11 -4X2S 3.4 ?
23 PsiBlast_CBE 82.9035%-185 - C11 -4X2S 2.6 ?
5 PsiBlast_PDB 82.6535%-173 - C11 -2NWX 2.9 ?
30 PsiBlast_CBE 82.6335%-171 - C11 -2NWX 3.7 ?
24 PsiBlast_CBE 82.5435%-184 - C11 -4X2S 3.0 ?
31 PsiBlast_CBE 82.3935%-176 - C11 -2NWX 3.8 ?
12 PsiBlast_PDB 81.6135%-178 - C11 -4IZM 3.7 ?
47 PsiBlast_CBE 81.3835%-176 - C11 -4IZM 3.8 ?
48 PsiBlast_CBE 80.2035%-174 - C11 -4IZM 4.1 ?