@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10430: (2016-06-16 )
MSDSNLTNPIKAFFHDEFPEQYQEPPGLQKNMKPVPDCGEKSYKGSGKLTGRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKELIEAEGRKAVLIPGDLSDESFCQDLVKQSHHELGGLDVLALVAGKQQAVENIEDLPTEQIYKTFEVNVFSLYWVVKAALPYLPEGASIITTTSVEGYNPSPMLLDYAATKNAIIGFTVGLGKQLASKGIRVNSVAPGPIWTPLQISGGQPTENIPKFGQGTPPAPLNRAGQPVELADVYVFLASENSSYVTSQVYGITGGIPTA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(3R3S)
?
[Raw transfer]



NAD_A_5(3R3S)
?
[Raw transfer]



NAD_A_5(3R3S)
?
[Raw transfer]



NAD_C_12(3R3S)
?
[Raw transfer]



NAD_D_15(3R3S)
?
[Raw transfer]



FMT_D_16(3R3S)
?
[Raw transfer]



GOL_C_18(3PK0)
?
[Raw transfer]



FMT_C_13(3R3S)
?
[Raw transfer]



GOL_B_14(3PK0)
?
[Raw transfer]



GOL_A_9(3PK0)
?
[Raw transfer]



GOL_D_22(3PK0)
?
[Raw transfer]
107 HHSearch 77.6566% -61 - C1 -3R3S 12.4 ?
23 PsiBlast_CBE 75.8065% -62 - C1 -3R3S 12.0 ?
1 PsiBlast_PDB 75.7565% -61 - C1 -3R3S 12.4 ?
21 PsiBlast_CBE 75.7465% -61 - C1 -3R3S 12.1 ?
22 PsiBlast_CBE 74.4665% -62 - C1 -3R3S 12.5 ?
119 HHSearch 68.7630%-103 - C1 -4J2H - ? -
98 PsiBlast_CBE 67.2732%-110 - C1 -3PK0 2.7 ?
121 HHSearch 67.1231% -91 - C1 -3TSC - ? -
97 PsiBlast_CBE 66.4032%-109 - C1 -3PK0 2.7 ?
96 PsiBlast_CBE 65.7032%-110 - C1 -3PK0 2.8 ?
99 PsiBlast_CBE 65.1832%-108 - C1 -3PK0 2.7 ?
75 PsiBlast_CBE 64.6333%-102 - C1 -4BMN - ? -
11 PsiBlast_PDB 64.0933%-107 - C1 -3WTC - ? -
116 HHSearch 63.6431% -87 - C1 -3ICC - ? -
59 PsiBlast_CBE 63.5633%-101 - C1 -4I5E - ? -
93 PsiBlast_CBE 63.3531% -82 - C1 -1G6K - DHG_BACME -
94 PsiBlast_CBE 63.1731% -80 - C1 -1G6K - DHG_BACME -
26 PsiBlast_CBE 63.1448% -66 - C1 -3I3O - ? -
53 PsiBlast_CBE 62.6533% -99 - C1 -4I5E - ? -
28 PsiBlast_CBE 62.6048% -61 - C1 -3I3O - ? -