@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10500: (2016-06-16 )
MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDTRLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPDMKLILSDGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCSEVIQKGISRWFSVTSRV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(2QA1)
?
[Raw transfer]



FAD_A_2(4K5S)
?
[Raw transfer]



FAD_A_3(4K5R)
?
[Raw transfer]



FAD_A_3(2QA1)
?
[Raw transfer]



FAD_A_2(4K5S)
?
[Raw transfer]



FAD_A_2(4ICY)
?
[Raw transfer]



FAD_A_3(4K2X)
?
[Raw transfer]



FAD_A_3(2QA2)
?
[Raw transfer]



FAD_B_7(4X4J)
?
[Raw transfer]



FAD_A_3(2QA2)
?
[Raw transfer]



FAD_A_3(4K2X)
?
[Raw transfer]



FAD_B_4(4K2X)
?
[Raw transfer]



FAD_A_3(2QA1)
?
[Raw transfer]



FAD_B_4(4K5R)
?
[Raw transfer]



EDO_A_4(2QA1)
?
[Raw transfer]



EDO_A_3(4ICY)
?
[Raw transfer]
1 PsiBlast_PDB 79.8143% -98 - C1 -4K2X 12.1 ?
114 HHSearch 79.4643% -99 - C1 -4K2X 12.1 ?
21 PsiBlast_CBE 78.7843% -96 - C1 -4K2X 12.1 ?
115 HHSearch 76.8743% -88 - C1 -4K5S 13.1 ?
3 PsiBlast_PDB 73.2342% -96 - C1 -4K5R 11.4 ?
2 PsiBlast_PDB 73.0642% -93 - C1 -4K5S 11.4 ?
5 PsiBlast_PDB 72.8038% -90 - C1 -2QA2 8.2 ?
22 PsiBlast_CBE 72.2342% -94 - C1 -4K5R 11.8 ?
112 HHSearch 71.0036% -83 - C1 -2QA2 8.2 ?
24 PsiBlast_CBE 70.0841% -76 - C1 -3FMW - ? -
4 PsiBlast_PDB 70.0841% -77 - C1 -3FMW - ? -
23 PsiBlast_CBE 70.0441% -74 - C1 -3FMW - ? -
25 PsiBlast_CBE 68.6936% -87 - C1 -4X4J 10.7 ?
6 PsiBlast_PDB 68.2636% -81 - C1 -4ICY 12.2 ?
101 Fugue 63.5436% -90 * C1 *2QA1 14.1 ?
111 HHSearch 63.1136% -91 - C1 -2QA1 14.1 ?
103 Fugue 62.8426% -98 - C1 -4Z2T - ? -
7 PsiBlast_PDB 61.9336% -86 - C1 -2QA1 14.1 ?
11 PsiBlast_PDB 61.7126% -90 - C1 -2R0P - ? -
9 PsiBlast_PDB 60.4626% -95 - C1 -2R0C - ? -