@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11210: (2016-06-17 )
MKKTIVFKCGGSVIRELSEEFYQNLKELRASGWKLAIVHGGGPEITNMLKRLNIKTEFSGGQRKTTKPVLEVAEMVLSGSVNKFFVAELAKHGLRAAGISGKDGGLLEADYLDPETYGEVGEIKKVDASMVNALMENGIIPVIAPLSMTSDCKTLNVNADLAASAVAGALEADKLMFVTDVDGIMKEKQRLDVLTPKEIQMLIKQEVITGGMIPKVNSALSALSDQVSEVMIVNGKGSFFAEQTFQGTKIVKAKEAVS

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(1GSJ)
ARGB_ECOLI
[Raw transfer]




X2W_B_10(4USJ)
NAGK_ARATH
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




ANP_A_3(1GS5)
ARGB_ECOLI
[Raw transfer]




ADP_A_6(4USJ)
NAGK_ARATH
[Raw transfer]




X2W_A_3(2X2W)
ARGB_ECOLI
[Raw transfer]




ADP_A_2(3L86)
ARGB_STRMU
[Raw transfer]




ADP_A_2(1OH9)
ARGB_ECOLI
[Raw transfer]




ADP_A_2(3L86)
ARGB_STRMU
[Raw transfer]




ADP_B_12(2RD5)
NAGK_ARATH
[Raw transfer]




ADP_A_2(1OHA)
ARGB_ECOLI
[Raw transfer]




NLG_B_24(3ZZF)
ARG56_YEAST
[Raw transfer]




NLG_D_(3ZZF)
ARG56_YEAST
[Raw transfer]




NLG_A_14(3ZZH)
ARG56_YEAST
[Raw transfer]




NLG_A_7(2JJ4)
ARGB_SYNE7
[Raw transfer]




NLG_A_12(3ZZF)
ARG56_YEAST
[Raw transfer]




NLG_B_8(2JJ4)
ARGB_SYNE7
[Raw transfer]




NLG_D_(3ZZH)
ARG56_YEAST
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




ADP_A_3(1OHB)
ARGB_ECOLI
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_B_17(2BTY)
ARGB_THEMA
[Raw transfer]




GOL_B_21(3ZZF)
ARG56_YEAST
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




NLG_C_19(2BTY)
ARGB_THEMA
[Raw transfer]




DTU_A_3(2WXB)
ARGB_ECOLI
[Raw transfer]




DTU_B_5(2WXB)
ARGB_ECOLI
[Raw transfer]




EDO_B_15(3ZZF)
ARG56_YEAST
[Raw transfer]




EDO_A_5(3ZZF)
ARG56_YEAST
[Raw transfer]




27 PsiBlast_CBE 90.9439%-134 - C1 -2BUF - ARGB_PSEAE -
21 PsiBlast_CBE 90.5144%-133 - C1 -2BTY 2.5 ARGB_THEMA
22 PsiBlast_CBE 89.8544%-128 - C1 -2BTY 2.2 ARGB_THEMA
1 PsiBlast_PDB 88.3244%-129 - C1 -2BTY 2.1 ARGB_THEMA
32 PsiBlast_CBE 88.2139%-128 - C1 -2BUF - ARGB_PSEAE -
69 HHSearch 88.1237%-124 * C1 *2RD5 5.1 NAGK_ARATH
31 PsiBlast_CBE 87.6839%-122 - C1 -2BUF - ARGB_PSEAE -
68 HHSearch 86.8443%-121 - C1 -2BTY 2.1 ARGB_THEMA
33 PsiBlast_CBE 86.8239%-121 - C1 -2BUF - ARGB_PSEAE -
28 PsiBlast_CBE 86.7839%-129 - C1 -2BUF - ARGB_PSEAE -
2 PsiBlast_PDB 86.0839%-126 - C1 -2BUF - ARGB_PSEAE -
6 PsiBlast_PDB 85.3239%-128 - C1 -2RD5 5.5 NAGK_ARATH
13 PsiBlast_PDB 83.9736%-144 - C1 -2X2W 3.7 ARGB_ECOLI
35 PsiBlast_CBE 83.7737%-114 - C1 -2V5H - ARGB_SYNE7 -
12 PsiBlast_PDB 83.5436%-146 - C1 -2WXB 2.9 ARGB_ECOLI
26 PsiBlast_CBE 83.4739%-123 - C1 -2BUF - ARGB_PSEAE -
4 PsiBlast_PDB 83.1237%-113 - C1 -2V5H - ARGB_SYNE7 -
30 PsiBlast_CBE 83.1139%-122 - C1 -2BUF - ARGB_PSEAE -
70 HHSearch 82.9736%-115 - C1 -2V5H - ARGB_SYNE7 -
67 HHSearch 82.8738%-115 - C1 -2BUF - ARGB_PSEAE -
40 PsiBlast_CBE 82.8139%-129 - C1 -4USJ 5.5 NAGK_ARATH
5 PsiBlast_PDB 81.7139%-123 - C1 -4USJ 6.1 NAGK_ARATH
41 PsiBlast_CBE 81.5339%-122 - C1 -2RD5 6.5 NAGK_ARATH
7 PsiBlast_PDB 81.2634%-137 - C1 -3L86 5.6 ARGB_STRMU
71 HHSearch 79.7634%-129 - C1 -3L86 5.6 ARGB_STRMU
43 PsiBlast_CBE 79.5936%-139 - C1 -2WXB 2.8 ARGB_ECOLI
3 PsiBlast_PDB 79.4837%-113 - C1 -2JJ4 3.9 ARGB_SYNE7
39 PsiBlast_CBE 78.7037%-113 - C1 -2JJ4 3.2 ARGB_SYNE7
9 PsiBlast_PDB 78.5436%-124 - C1 -1OH9 5.3 ARGB_ECOLI
10 PsiBlast_PDB 77.2336%-123 - C1 -1OHA 6.0 ARGB_ECOLI
16 PsiBlast_PDB 76.6836%-128 - C1 -1GSJ 5.5 ARGB_ECOLI
57 Fugue 76.5034%-118 - C1 -1GS5 6.0 ARGB_ECOLI
11 PsiBlast_PDB 75.8636%-124 - C1 -1OHB 4.0 ARGB_ECOLI
8 PsiBlast_PDB 74.8336%-123 - C1 -1GS5 5.9 ARGB_ECOLI
73 HHSearch 73.2834%-111 - C1 -1GS5 6.0 ARGB_ECOLI
47 PsiBlast_CBE 64.5631%-134 - C1 -3ZZH 5.2 ARG56_YEAST
44 PsiBlast_CBE 64.4331%-132 - C1 -3ZZH 5.3 ARG56_YEAST
51 PsiBlast_CBE 64.3231%-136 - C1 -3ZZF 4.8 ARG56_YEAST
50 PsiBlast_CBE 63.8731%-134 - C1 -3ZZF 4.9 ARG56_YEAST
48 PsiBlast_CBE 63.3031%-134 - C1 -3ZZF 5.1 ARG56_YEAST