@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11250: (2016-06-17 )
MHTVTQTSLYGKDLLTLKDLSEEDINALLAEAGELKQNKIQPIFHGKTLAMIFEKSSTRTRVSFEAGMAQLGGSALFLSQKDLQLGRGETVADTAKVLSGYVDAIMIRTFEHEKVEELAKEADIPVINGLTDKYHPCQALADLLTIKEIKGKLKGVKVAYIGDGNNVAHSLMIGCAKMGCDISIASPKGYEVLDEAAEAAKTYALQSGSSVTLTDDPIEAVKDADVIYSDVFTSMGQEAEEQERLAVFAPYQVNAALVSHAKPDYTFLHCLPAHREEEVTAEIIDGPNSAVFQQAENRLHVQKALLKAILYKGESSKNC

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSQ_D_4(1DUV)
OTC1_ECOLI
[Raw transfer]




PSQ_D_4(1DUV)
OTC1_ECOLI
[Raw transfer]




PSQ_F_6(1DUV)
OTC1_ECOLI
[Raw transfer]




PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]




PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]




PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]




PUW_B_9(4A8H)
PTC_ENTFA
[Raw transfer]




CIR_C_16(4JQO)
OTC_VIBVU
[Raw transfer]




CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]




PAO_A_2(4A8T)
PTC_ENTFA
[Raw transfer]




CP_C_12(4NF2)
OTC_BACAN
[Raw transfer]




CP_G_7(1C9Y)
OTC_HUMAN
[Raw transfer]




CIR_B_11(4JQO)
OTC_VIBVU
[Raw transfer]




PAO_A_2(4A8T)
PTC_ENTFA
[Raw transfer]




CIR_A_5(4JQO)
OTC_VIBVU
[Raw transfer]




PUW_A_3(4A8H)
PTC_ENTFA
[Raw transfer]




CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]




CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]




CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]




CP_A_4(4JFR)
OTC_VIBVU
[Raw transfer]




CP_B_10(4NF2)
OTC_BACAN
[Raw transfer]




CP_A_5(4H31)
OTC_VIBVU
[Raw transfer]




CP_B_11(2I6U)
OTC_MYCTU
[Raw transfer]




CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]




CP_B_6(4JFR)
OTC_VIBVU
[Raw transfer]




CP_D_4(1EP9)
OTC_HUMAN
[Raw transfer]




CP_J_10(1FVO)
OTC_HUMAN
[Raw transfer]




PA9_A_2(3M4N)
AOTC_XANCP
[Raw transfer]




PA9_A_2(3M5C)
AOTC_XANCP
[Raw transfer]




PA9_A_2(3M5D)
AOTC_XANCP
[Raw transfer]




CP_G_7(1FVO)
OTC_HUMAN
[Raw transfer]




ARG_A_6(4JHX)
OTC_VIBVU
[Raw transfer]




PE5_B_26(4H31)
OTC_VIBVU
[Raw transfer]




22 PsiBlast_CBE 93.4758%-106 - C5 -4NF2 4.9 OTC_BACAN
21 PsiBlast_CBE 93.4158%-106 - C5 -4NF2 4.9 OTC_BACAN
103 HHSearch 93.3059%-106 - C5 -1PVV - OTC_PYRFU -
2 PsiBlast_PDB 93.1560%-111 - C5 -1PVV - OTC_PYRFU -
4 PsiBlast_PDB 92.9958%-106 - C5 -4NF2 4.9 OTC_BACAN
1 PsiBlast_PDB 92.2160%-108 - C5 -1A1S - OTC_PYRFU -
102 HHSearch 92.0758%-104 - C5 -4NF2 4.9 OTC_BACAN
3 PsiBlast_PDB 91.8259%-113 - C5 -4EP1 - OTC_BACAN -
6 PsiBlast_PDB 89.5650%-108 - C5 -4OH7 - ? -
106 HHSearch 89.0246%-122 - C5 -3TPF - OTC_CAMJE -
23 PsiBlast_CBE 88.5550%-109 - C5 -4OH7 - ? -
110 HHSearch 88.1549%-103 - C5 -4OH7 - ? -
34 PsiBlast_CBE 88.0938%-124 - C5 -3SDS - OTC_COCIM -
107 HHSearch 87.6550%-117 - C5 -3GD5 - OTC_GLOVI -
30 PsiBlast_CBE 87.3244%-106 - C5 -1FVO 4.0 OTC_HUMAN
33 PsiBlast_CBE 87.1138%-120 - C5 -3SDS - OTC_COCIM -
14 PsiBlast_PDB 86.9044%-104 - C5 -1FVO 3.8 OTC_HUMAN
42 PsiBlast_CBE 86.8740%-107 - C5 -4JHX - OTC_VIBVU -
5 PsiBlast_PDB 86.8252%-121 - C5 -3GD5 - OTC_GLOVI -
120 HHSearch 86.7540%-118 - C5 -3SDS - OTC_COCIM -
11 PsiBlast_PDB 86.5644%-103 - C5 -1OTH 7.3 OTC_HUMAN
109 HHSearch 86.3544%-102 - C5 -1OTH 7.5 OTC_HUMAN
12 PsiBlast_PDB 86.2544%-101 - C5 -1C9Y 4.7 OTC_HUMAN
13 PsiBlast_PDB 85.9344%-102 - C5 -1EP9 4.8 OTC_HUMAN
105 HHSearch 85.4148% -98 - C5 -2I6U 4.2 OTC_MYCTU
28 PsiBlast_CBE 85.2547% -98 - C5 -2I6U 4.2 OTC_MYCTU
45 PsiBlast_CBE 84.7340%-105 - C5 -4JFR 4.4 OTC_VIBVU
9 PsiBlast_PDB 84.6547% -98 - C5 -2I6U 4.1 OTC_MYCTU
46 PsiBlast_CBE 84.5240%-103 - C5 -4JFR 4.7 OTC_VIBVU
38 PsiBlast_CBE 84.3240% -99 - C5 -4JQO 3.8 OTC_VIBVU
29 PsiBlast_CBE 84.0347% -96 - C5 -2I6U 4.4 OTC_MYCTU
40 PsiBlast_CBE 84.0140%-103 - C5 -4JQO 3.8 OTC_VIBVU
43 PsiBlast_CBE 83.9040%-100 - C5 -4JHX 2.8 OTC_VIBVU
49 PsiBlast_CBE 83.8040%-103 - C5 -4H31 4.9 OTC_VIBVU
39 PsiBlast_CBE 83.5240%-100 - C5 -4JQO 3.7 OTC_VIBVU
48 PsiBlast_CBE 83.2240% -98 - C5 -4H31 1.9 OTC_VIBVU
69 PsiBlast_CBE 82.2941%-106 - C5 -4A8H 6.3 PTC_ENTFA
70 PsiBlast_CBE 82.2241%-106 - C5 -4A8H 6.0 PTC_ENTFA
50 PsiBlast_CBE 81.5441%-107 - C5 -4A8T 6.0 PTC_ENTFA
111 HHSearch 80.8138% -99 - C5 -4A8T 5.9 PTC_ENTFA
114 HHSearch 80.0240% -92 - C5 -1DUV 6.9 OTC1_ECOLI
79 PsiBlast_CBE 76.9838% -90 - C5 -1DUV 6.9 OTC1_ECOLI
77 PsiBlast_CBE 76.2038% -85 - C5 -1DUV 6.7 OTC1_ECOLI
90 PsiBlast_CBE 76.1733%-104 - C5 -3M5C 5.4 AOTC_XANCP
78 PsiBlast_CBE 76.1338% -88 - C5 -1DUV 6.8 OTC1_ECOLI
91 PsiBlast_CBE 75.3832%-105 - C5 -3M5D 4.9 AOTC_XANCP
92 PsiBlast_CBE 75.3632%-103 - C5 -3M4N 5.6 AOTC_XANCP