@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11370: (2016-06-17 )
MTAANQETILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLKKGETLGIVGESGCGKSTAGRTMIRLYKPTEGQILFKGQDISNLSEEKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTHNMYTMRERNEKVEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIADEPVSALDVSIQAQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKMMELTGKHELYDNPLHPYTQALLSSVPVTRKRGSVKRERIVLKGELPSPANPPKGCVFHTRCPVAKPICKEQIPEFKEAAPSHFVACHLYS

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_B_3(4FWI)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




108 HHSearch 92.5238%-116 - C1 -4FWI 5.8 ?
1 PsiBlast_PDB 90.4437%-118 - C1 -4FWI - ? -
130 Fugue 78.3530%-116 - C1 -3TUZ - METN_ECOLI -
113 HHSearch 75.8734%-127 - C1 -3TUI - METN_ECOLI -
5 PsiBlast_PDB 74.6235%-133 - C1 -3TUJ - METN_ECOLI -
3 PsiBlast_PDB 73.9135%-127 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 73.1835%-134 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 72.7235%-135 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 72.6835%-129 - C1 -3TUZ - METN_ECOLI -
10 PsiBlast_PDB 72.3933%-117 - C1 -1OXU - ? -
30 PsiBlast_CBE 72.0033%-120 - C1 -1OXU - ? -
25 PsiBlast_CBE 71.9735%-126 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 71.9133%-116 - C1 -1OXV - ? -
11 PsiBlast_PDB 71.7533%-115 - C1 -1OXV - ? -
134 Fugue 71.5226%-101 - C1 -1Z47 - ? -
27 PsiBlast_CBE 71.3233%-119 - C1 -1OXV - ? -
26 PsiBlast_CBE 71.0435%-123 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 70.9835%-129 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 70.6335%-131 - C1 -3TUZ - METN_ECOLI -
13 PsiBlast_PDB 70.3333%-114 - C1 -1OXX - ? -
14 PsiBlast_PDB 68.9432%-100 - C1 -4U00 6.0 ?
51 PsiBlast_CBE 66.5231%-102 - C1 -1B0U 4.8 HISP_SALTY
48 PsiBlast_CBE 66.3234%-104 - C1 -4YMU 5.5 ?
46 PsiBlast_CBE 65.1534%-100 - C1 -4YMV 4.3 ?
47 PsiBlast_CBE 64.5734% -99 - C1 -4YMU 5.4 ?
115 HHSearch 63.0832%-108 - C1 -3FVQ 7.7 FBPC_NEIG1
96 PsiBlast_CBE 56.8231%-103 - C1 -4AYX 5.8 ABCBA_HUMAN
97 PsiBlast_CBE 56.7831% -99 - C1 -4AYT 6.6 ABCBA_HUMAN
95 PsiBlast_CBE 55.5631%-104 - C1 -4AYW 6.4 ABCBA_HUMAN
54 PsiBlast_CBE 54.9535%-101 - C1 -3TIF 4.6 Y796_METJA
63 PsiBlast_CBE 54.8034%-100 - C1 -2FGK 6.0 HLYBP_ECOLX
56 PsiBlast_CBE 54.7034%-119 - C1 -2PMK 5.3
86 PsiBlast_CBE 53.6034%-110 - C1 -1XEF 5.8
87 PsiBlast_CBE 52.8534%-114 - C1 -1XEF 5.7 HLYBP_ECOLX
89 PsiBlast_CBE 52.7734%-111 - C1 -1XEF 4.7 HLYBP_ECOLX
59 PsiBlast_CBE 52.7634%-115 - C1 -3B5J 5.4
84 PsiBlast_CBE 52.6834%-103 - C1 -2FGJ 5.6 HLYBP_ECOLX
64 PsiBlast_CBE 52.6634%-115 - C1 -2FFB 5.1
61 PsiBlast_CBE 52.5234%-101 - C1 -2FGK 5.7 HLYBP_ECOLX
88 PsiBlast_CBE 52.4934%-108 - C1 -1XEF 5.9 HLYBP_ECOLX
55 PsiBlast_CBE 52.0535% -96 - C1 -3TIF 4.4 Y796_METJA
57 PsiBlast_CBE 51.8634%-113 - C1 -2FF7 5.0
81 PsiBlast_CBE 51.6634%-109 - C1 -2FGJ 5.5
83 PsiBlast_CBE 51.5234%-112 - C1 -2FGJ 5.8 HLYBP_ECOLX
85 PsiBlast_CBE 51.4534%-112 - C1 -2FFA 5.1
82 PsiBlast_CBE 51.0234%-106 - C1 -2FGJ 5.5 HLYBP_ECOLX
60 PsiBlast_CBE 49.9734%-103 - C1 -2FGK 6.0
62 PsiBlast_CBE 49.7434%-103 - C1 -2FGK 6.2 HLYBP_ECOLX
91 PsiBlast_CBE 48.1334% -96 - C1 -5DGX 5.2
103 PsiBlast_CBE 47.7132%-127 - C1 -3NHB 5.2
104 PsiBlast_CBE 47.3932%-122 - C1 -3NHA 4.9
105 PsiBlast_CBE 46.1432%-121 - C1 -3NH9 5.0