@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11420: (2016-06-18 )
MKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYNSYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADILLYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQDRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYM_A_10(1I6K)
SYW_GEOSE
[Raw transfer]




TYM_A_10(1I6M)
SYW_GEOSE
[Raw transfer]




TYM_A_10(1I6L)
SYW_GEOSE
[Raw transfer]




TYM_A_10(1I6K)
SYW_GEOSE
[Raw transfer]




AQP_A_3(2OV4)
SYW_GEOSE
[Raw transfer]




ATP_A_2(5DK4)
SYW_GEOSE
[Raw transfer]




ATP_A_3(1M83)
SYW_GEOSE
[Raw transfer]




ATP_A_4(1MAU)
SYW_GEOSE
[Raw transfer]




GOL_A_14(1I6M)
SYW_GEOSE
[Raw transfer]




GOL_A_3(3N9I)
SYW_YERPE
[Raw transfer]




GOL_A_3(3N9I)
SYW_YERPE
[Raw transfer]




5BX_A_5(5DK4)
SYW_GEOSE
[Raw transfer]




TRP_A_4(3TZL)
SYW_CAMJE
[Raw transfer]




TRP_A_4(3TZL)
SYW_CAMJE
[Raw transfer]




TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]




TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]




TRP_A_2(3SZ3)
SYW_VIBCH
[Raw transfer]




TRP_A_2(3SZ3)
SYW_VIBCH
[Raw transfer]




ANL_A_4(2OV4)
SYW_GEOSE
[Raw transfer]




41 HHSearch 93.30100%-112 - C4 -3PRH - SYW_BACSU -
1 PsiBlast_PDB 93.0699%-112 - C4 -3PRH - SYW_BACSU -
8 PsiBlast_PDB 91.0376%-120 - C4 -1D2R - SYW_GEOSE -
61 Fugue 90.8275%-119 * C4 *1D2R - SYW_GEOSE -
23 PsiBlast_CBE 90.7876%-119 - C4 -1MB2 - SYW_GEOSE -
62 Fugue 90.6875%-117 - C4 -1D2R - SYW_GEOSE -
27 PsiBlast_CBE 90.4176%-120 - C4 -1MB2 - SYW_GEOSE -
25 PsiBlast_CBE 90.3476%-119 - C4 -1MB2 - SYW_GEOSE -
6 PsiBlast_PDB 90.2476%-122 - C4 -1MB2 - SYW_GEOSE -
24 PsiBlast_CBE 90.2176%-118 - C4 -1MB2 - SYW_GEOSE -
26 PsiBlast_CBE 90.1576%-121 - C4 -1MB2 - SYW_GEOSE -
28 PsiBlast_CBE 89.9276%-118 - C4 -1MAW - SYW_GEOSE -
30 PsiBlast_CBE 89.8576%-116 - C4 -1MAW - SYW_GEOSE -
32 PsiBlast_CBE 89.5276%-121 - C4 -1MAW - SYW_GEOSE -
29 PsiBlast_CBE 89.4276%-120 - C4 -1MAW - SYW_GEOSE -
11 PsiBlast_PDB 89.1374%-118 - C4 -5DK4 10.3 SYW_GEOSE
7 PsiBlast_PDB 89.0676%-114 - C4 -2OV4 8.7 SYW_GEOSE
5 PsiBlast_PDB 89.0376%-119 - C4 -1MAW - SYW_GEOSE -
2 PsiBlast_PDB 88.9776%-112 - C4 -1I6M 10.9 SYW_GEOSE
4 PsiBlast_PDB 88.8876%-111 - C4 -1MAU 9.8 SYW_GEOSE
3 PsiBlast_PDB 88.7476%-109 - C4 -1M83 9.5 SYW_GEOSE
10 PsiBlast_PDB 88.2874%-113 - C4 -1I6L 5.7 SYW_GEOSE
42 HHSearch 87.7976%-108 - C4 -1I6K 7.3 SYW_GEOSE
9 PsiBlast_PDB 87.2474%-108 - C4 -1I6K 7.3 SYW_GEOSE
46 HHSearch 80.1352%-106 - C4 -3N9I 2.2 SYW_YERPE
15 PsiBlast_PDB 79.3353%-104 - C4 -3N9I 2.2 SYW_YERPE
16 PsiBlast_PDB 78.4650%-109 - C4 -3SZ3 4.2 SYW_VIBCH
45 HHSearch 76.9748%-108 - C4 -3SZ3 4.2 SYW_VIBCH
49 HHSearch 75.3638%-123 - C4 -3TZL 3.0 SYW_CAMJE
20 PsiBlast_PDB 72.9336%-124 - C4 -3TZL 3.0 SYW_CAMJE
48 HHSearch 69.9531%-124 - C4 -2G36 2.2 SYW_THEMA
37 PsiBlast_CBE 68.4732%-126 - C4 -2G36 3.9 SYW_THEMA