@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11670: (2016-06-18 )
MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNKEVNQDWLHAFRIDRKEAVQI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_G_7(1NG3)
GLOX_BACSU
[Raw transfer]




FAD_G_7(1NG4)
GLOX_BACSU
[Raw transfer]




FAD_K_11(1NG4)
GLOX_BACSU
[Raw transfer]




FAD_K_11(1NG3)
GLOX_BACSU
[Raw transfer]




FAD_A_3(4YSH)
?
[Raw transfer]




FAD_B_7(4YSH)
?
[Raw transfer]




FAD_A_3(4YSH)
?
[Raw transfer]




23 PsiBlast_CBE 85.0599%-116 - C2 -1RYI - GLOX_BACSU -
22 PsiBlast_CBE 83.1799%-113 - C2 -1RYI - GLOX_BACSU -
1 PsiBlast_PDB 83.0699%-113 - C2 -1RYI - GLOX_BACSU -
21 PsiBlast_CBE 83.0199%-111 - C2 -1RYI - GLOX_BACSU -
4 PsiBlast_PDB 82.7799%-115 - C2 -3IF9 - GLOX_BACSU -
3 PsiBlast_PDB 82.2499%-110 - C2 -1NG4 14.8 GLOX_BACSU
27 PsiBlast_CBE 82.1099%-113 - C2 -3IF9 - GLOX_BACSU -
2 PsiBlast_PDB 81.7899%-110 - C2 -1NG3 14.2 GLOX_BACSU
24 PsiBlast_CBE 81.7199%-110 - C2 -1NG4 14.5 GLOX_BACSU
25 PsiBlast_CBE 81.4799%-110 - C2 -1NG3 14.0 GLOX_BACSU
26 PsiBlast_CBE 81.2799%-111 - C2 -3IF9 - GLOX_BACSU -
28 PsiBlast_CBE 80.3799%-112 - C2 -3IF9 - GLOX_BACSU -
65 HHSearch 78.9098%-109 - C2 -1RYI - GLOX_BACSU -
66 HHSearch 55.8738%-117 - C2 -4YSH 7.9 ?
67 HHSearch 51.5925%-106 * C2 *1Y56 - ? -
29 PsiBlast_CBE 51.1437%-108 - C2 -4YSH 9.0 ?
73 HHSearch 50.1425%-111 - C2 -4PAB - M2GD_RAT -
7 PsiBlast_PDB 49.9625%-108 - C2 -4PAA - M2GD_RAT -
5 PsiBlast_PDB 49.9037%-106 - C2 -4YSH 7.1 ?
8 PsiBlast_PDB 49.4125%-107 - C2 -4PAB - M2GD_RAT -