@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11870: (2016-06-18 )
MSQHVETKLAQIGNRSDEVTGTVSAPIYLSTAYRHRGIGESTGFDYVRTKNPTRQLVEDAIANLENGARGLAFSSGMAAIQTIMALFKSGDELIVSSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVFVETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMRGMKTLSLRMRQHQANAQELAAFLEEQEEISDVLYPGKGGMLSFRLQKEEWVNPFLKALKTICFAESLGGVESFITYPATQTHMDIPEEIRIANGVCNRLLRFSVGIEHAEDLKEDLKQALCQVKEGAVSFE

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




LCS_A_2(4OMA)
?
[Raw transfer]




PLP_B_8(1E5F)
?
[Raw transfer]




PPJ_B_7(1E5E)
?
[Raw transfer]




PLP_A_3(1E5F)
?
[Raw transfer]




PLP_B_5(5DX5)
?
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




NLE_A_2(3JWB)
?
[Raw transfer]




PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(2CTZ)
?
[Raw transfer]




MPJ_A_2(3JWA)
?
[Raw transfer]




EDO_A_22(1PFF)
?
[Raw transfer]




ECX_A_2(3JW9)
?
[Raw transfer]




28 PsiBlast_CBE 83.5145%-101 - C1 -4IY7 - ? -
1 PsiBlast_PDB 83.2148%-102 - C1 -4L0O - METB_HELPY -
30 PsiBlast_CBE 83.0445%-102 - C1 -4IY7 - ? -
103 HHSearch 82.9946%-101 - C1 -4IY7 - ? -
36 PsiBlast_CBE 82.9942%-115 - C1 -3COG - CGL_HUMAN -
113 HHSearch 82.7850%-102 - C1 -4L0O - METB_HELPY -
9 PsiBlast_PDB 82.7142%-112 - C1 -2NMP - CGL_HUMAN -
3 PsiBlast_PDB 81.8645%-100 - C1 -4IY7 - ? -
29 PsiBlast_CBE 81.7445%-102 - C1 -4IY7 - ? -
4 PsiBlast_PDB 81.7045%-102 - C1 -4IYO - ? -
37 PsiBlast_CBE 81.6142%-108 - C1 -2NMP - CGL_HUMAN -
34 PsiBlast_CBE 81.5842%-110 * C1 *3COG - CGL_HUMAN -
38 PsiBlast_CBE 81.5542%-110 - C1 -2NMP - CGL_HUMAN -
39 PsiBlast_CBE 80.9140%-101 - C1 -1CS1 - METB_ECOLI -
101 HHSearch 80.8943%-109 - C1 -3COG - CGL_HUMAN -
10 PsiBlast_PDB 80.7542%-112 - C1 -3COG - CGL_HUMAN -
26 PsiBlast_CBE 80.5948%-103 - C1 -4L0O - METB_HELPY -
35 PsiBlast_CBE 80.5442%-111 - C1 -3COG - CGL_HUMAN -
25 PsiBlast_CBE 79.7548%-104 - C1 -4L0O - METB_HELPY -
121 Fugue 79.6942%-102 - C1 -1CS1 - METB_ECOLI -
107 HHSearch 79.5936%-112 - C1 -1E5E 5.3 ?
69 PsiBlast_CBE 79.3036%-118 - C1 -1E5E 4.9 ?
105 HHSearch 78.6441%-100 - C1 -5DX5 4.1 ?
67 PsiBlast_CBE 78.5236%-118 - C1 -1E5F 3.7 ?
45 PsiBlast_CBE 77.9236%-106 - C1 -4HF8 6.0 ?
68 PsiBlast_CBE 77.7336%-114 - C1 -1E5F 3.6 ?
70 PsiBlast_CBE 77.4036%-114 - C1 -1E5E 5.3 ?
61 PsiBlast_CBE 77.4035%-107 - C1 -3JW9 3.3 ?
20 PsiBlast_PDB 76.9636%-108 - C1 -4OMA 6.2 ?
62 PsiBlast_CBE 76.7735%-106 - C1 -3JWB 3.9 ?
12 PsiBlast_PDB 76.3839% -96 - C1 -5DX5 4.1 ?
63 PsiBlast_CBE 76.0935%-105 - C1 -3JWA 3.0 ?
40 PsiBlast_CBE 74.7539% -94 - C1 -5DX5 3.8 ?
106 HHSearch 73.7038%-107 - C1 -1IBJ 3.9 METC_ARATH
13 PsiBlast_PDB 72.8736%-108 - C1 -1IBJ 3.9 METC_ARATH
41 PsiBlast_CBE 71.9436%-103 - C1 -1IBJ 3.2 METC_ARATH
92 PsiBlast_CBE 71.8738%-122 - C1 -1PFF 2.0 ?
119 HHSearch 62.5534% -92 - C1 -2CTZ 4.6 ?