@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu12210: (2016-06-19 )
MNVLNRRQALQRALLNGKNKQDAYHPFPWYESMRKDAPVSFDEENQVWSVFLYDDVKKVVGDKELFSSCMPQQTSSIGNSIINMDPPKHTKIRSVVNKAFTPRVMKQWEPRIQEITDELIQKFQGRSEFDLVHDFSYPLPVIVISELLGVPSAHMEQFKAWSDLLVSTPKDKSEEAEKAFLEERDKCEEELAAFFAGIIEEKRNKPEQDIISILVEAEETGEKLSGEELIPFCTLLLVAGNETTTNLISNAMYSILETPGVYEELRSHPELMPQAVEEALRFRAPAPVLRRIAKRDTEIGGHLIKEGDMVLAFVASANRDEAKFDRPHMFDIRRHPNPHIAFGHGIHFCLGAPLARLEANIALTSLISAFPHMECVSITPIENSVIYGLKSFRVKM

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(4RM4)
YJIB_BACSU
[Raw transfer]




HEM_A_2(4RM4)
YJIB_BACSU
[Raw transfer]




HEM_A_2(2WIO)
ERYK_SACEN
[Raw transfer]




HEM_A_3(1IO7)
CP119_SULAC
[Raw transfer]




HEM_C_21(3R9B)
?
[Raw transfer]




HEM_A_2(3A4G)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(2JJN)
ERYK_SACEN
[Raw transfer]




HEM_A_2(3ZKP)
ERYK_SACEN
[Raw transfer]




HEM_A_2(2JJP)
ERYK_SACEN
[Raw transfer]




HEM_A_3(2JJO)
ERYK_SACEN
[Raw transfer]




HEM_A_2(4E2P)
?
[Raw transfer]




HEM_A_2(2XFH)
ERYK_SACEN
[Raw transfer]




HEM_A_2(2YCA)
MYCG_MICGR
[Raw transfer]




HEM_A_2(4E2P)
?
[Raw transfer]




HEM_A_3(4AW3)
MYCG_MICGR
[Raw transfer]




HEM_B_11(3R9B)
?
[Raw transfer]




HEM_A_2(3A4G)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(4GGV)
?
[Raw transfer]




HEM_A_2(2Y98)
MYCG_MICGR
[Raw transfer]




HEM_C_14(2Y46)
MYCG_MICGR
[Raw transfer]




HEM_B_11(4AW3)
MYCG_MICGR
[Raw transfer]




HEM_A_2(3R9C)
?
[Raw transfer]




HEM_B_9(2Y46)
MYCG_MICGR
[Raw transfer]




HEM_A_2(3A4H)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(2WM5)
CP124_MYCTU
[Raw transfer]




HEM_A_2(3VRM)
CPVDH_PSEAH
[Raw transfer]




HEM_B_14(2Y5N)
MYCG_MICGR
[Raw transfer]




HEM_A_3(2Y5N)
MYCG_MICGR
[Raw transfer]




HEM_A_4(2Y46)
MYCG_MICGR
[Raw transfer]




HEM_A_4(3R9B)
?
[Raw transfer]




HEM_A_3(4YT3)
?
[Raw transfer]




HEM_B_5(4YT3)
?
[Raw transfer]




HEM_A_4(3ZSN)
MYCG_MICGR
[Raw transfer]




HEM_C_16(3ZSN)
MYCG_MICGR
[Raw transfer]




HEM_B_10(3ZSN)
MYCG_MICGR
[Raw transfer]




HEM_A_4(2Y5Z)
MYCG_MICGR
[Raw transfer]




HEM_C_18(2Y5Z)
MYCG_MICGR
[Raw transfer]




HEM_B_11(2Y5Z)
MYCG_MICGR
[Raw transfer]




CL6_A_3(2XFH)
ERYK_SACEN
[Raw transfer]




HEM_A_2(3WVS)
?
[Raw transfer]




HEM_B_4(4Z5P)
?
[Raw transfer]




D12_A_14(3R9B)
?
[Raw transfer]




HEM_A_3(4Z5P)
?
[Raw transfer]




GOL_A_8(3MGX)
?
[Raw transfer]




ECL_A_3(3R9C)
?
[Raw transfer]




EDO_C_26(3R9B)
?
[Raw transfer]




EDO_A_4(2WIY)
?
[Raw transfer]




119 HHSearch 92.14100%-135 - C6 -4RM4 12.9 YJIB_BACSU
1 PsiBlast_PDB 92.14100%-135 - C6 -4RM4 12.9 YJIB_BACSU
91 PsiBlast_CBE 75.2735%-130 - C6 -3A4H 12.7 CPVDH_PSEAH
105 PsiBlast_CBE 74.8834%-129 - C6 -3A50 - CPVDH_PSEAH -
100 PsiBlast_CBE 74.8134%-132 - C6 -3A51 - CPVDH_PSEAH -
93 PsiBlast_CBE 74.8034%-134 - C6 -3VRM 13.0 CPVDH_PSEAH
101 PsiBlast_CBE 74.6734%-128 - C6 -3A50 - CPVDH_PSEAH -
96 PsiBlast_CBE 74.6534%-128 - C6 -3A51 - CPVDH_PSEAH -
108 PsiBlast_CBE 74.5834%-129 - C6 -3A4Z - CPVDH_PSEAH -
98 PsiBlast_CBE 74.5234%-132 - C6 -3A51 - CPVDH_PSEAH -
106 PsiBlast_CBE 74.4734%-127 - C6 -3A4Z - CPVDH_PSEAH -
7 PsiBlast_PDB 74.3537%-121 - C6 -2VZM - PIKC_STRVZ -
92 PsiBlast_CBE 74.1435%-130 - C6 -3A4G 12.4 CPVDH_PSEAH
103 PsiBlast_CBE 74.1334%-129 - C6 -3A50 - CPVDH_PSEAH -
46 PsiBlast_CBE 74.1137%-120 - C6 -2CD8 - PIKC_STRVZ -
48 PsiBlast_CBE 73.9037%-119 - C6 -2C6H - PIKC_STRVZ -
107 PsiBlast_CBE 73.7834%-129 - C6 -3A4Z - CPVDH_PSEAH -
102 PsiBlast_CBE 73.6734%-128 - C6 -3A50 - CPVDH_PSEAH -
43 PsiBlast_CBE 73.6237%-119 - C6 -2VZM - PIKC_STRVZ -
42 PsiBlast_CBE 73.6237%-122 - C6 -3ZK5 - PIKC_STRVZ -
140 HHSearch 73.4236%-123 - C6 -3A4G 12.4 CPVDH_PSEAH
2 PsiBlast_PDB 73.2541%-128 - C6 -4YT3 12.8 ?
21 PsiBlast_CBE 72.8441%-131 - C6 -4YT3 12.8 ?
3 PsiBlast_PDB 72.3037%-128 - C6 -4GGV 10.3 ?
65 PsiBlast_CBE 71.8736%-132 - C6 -3WVS 12.0 ?
121 HHSearch 71.0733%-131 - C6 -4E2P 11.2 ?
139 HHSearch 70.7433%-106 - C6 -2WM5 12.5 CP124_MYCTU
78 PsiBlast_CBE 70.6637%-126 - C6 -2YCA 11.0 MYCG_MICGR
83 PsiBlast_CBE 70.4437%-124 - C6 -2Y5N 10.4 MYCG_MICGR
85 PsiBlast_CBE 70.4237%-124 - C6 -2Y46 10.7 MYCG_MICGR
71 PsiBlast_CBE 70.3939%-114 - C6 -2WIO 12.5 ERYK_SACEN
109 Fugue 70.0237%-132 - C6 -1IO7 12.4 CP119_SULAC
84 PsiBlast_CBE 69.9637%-122 - C6 -2Y5N 11.4 MYCG_MICGR
80 PsiBlast_CBE 69.9237%-120 - C6 -2Y5Z 10.1 MYCG_MICGR
79 PsiBlast_CBE 69.9137%-121 - C6 -2Y98 11.1 MYCG_MICGR
87 PsiBlast_CBE 69.8737%-121 - C6 -2Y46 10.1 MYCG_MICGR
66 PsiBlast_CBE 69.8039%-116 - C6 -3ZKP 12.8 ERYK_SACEN
61 PsiBlast_CBE 69.7936%-116 - C6 -3R9C 12.8 ?
94 PsiBlast_CBE 69.7834%-128 - C6 -4Z5P 12.0 ?
69 PsiBlast_CBE 69.7639%-114 - C6 -2JJO 12.8 ERYK_SACEN
72 PsiBlast_CBE 69.6637%-121 - C6 -4AW3 11.3 MYCG_MICGR
73 PsiBlast_CBE 69.6537%-123 - C6 -4AW3 11.6 MYCG_MICGR
86 PsiBlast_CBE 69.4837%-120 - C6 -2Y46 10.8 MYCG_MICGR
95 PsiBlast_CBE 69.2734%-128 - C6 -4Z5P 12.0 ?
81 PsiBlast_CBE 69.2737%-126 - C6 -2Y5Z 10.9 MYCG_MICGR
67 PsiBlast_CBE 69.2739%-114 - C6 -2XFH 12.5 ERYK_SACEN
88 PsiBlast_CBE 69.2536%-118 - C6 -3ZSN 11.8 MYCG_MICGR
90 PsiBlast_CBE 69.1536%-119 - C6 -3ZSN 11.3 MYCG_MICGR
63 PsiBlast_CBE 68.9436%-122 - C6 -3R9B 13.1 ?
89 PsiBlast_CBE 68.8536%-121 - C6 -3ZSN 11.5 MYCG_MICGR
82 PsiBlast_CBE 68.8437%-121 - C6 -2Y5Z 10.2 MYCG_MICGR
70 PsiBlast_CBE 68.7639%-107 - C6 -2JJN 12.9 ERYK_SACEN
62 PsiBlast_CBE 68.6636%-122 - C6 -3R9B 13.0 ?
68 PsiBlast_CBE 68.3539%-113 - C6 -2JJP 13.0 ERYK_SACEN
64 PsiBlast_CBE 68.1936%-123 - C6 -3R9B 13.0 ?
19 PsiBlast_PDB 68.0736%-136 - C6 -4E2P 11.2 ?