@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13000: (2016-06-20 )
MRRLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIHNLYNTHKARLLVVDELLEAVGLHPDFGSRYPHEFSGGQRQRIGIARALSLNPEFIVADEPISALDVSVQAQVVNLLKRLQKEKGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYREPLHPYTKALLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGESRPQLQEIEPGRFVACHLYRNAETKEKVR

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




SF4_B_2(4FWI)
?
[Raw transfer]




SF4_B_2(4FWI)
?
[Raw transfer]




ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




121 HHSearch 91.8534%-128 - C1 -4FWI 3.4 ?
1 PsiBlast_PDB 85.4435%-124 - C1 -4FWI 3.4 ?
3 PsiBlast_PDB 80.7135%-145 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 80.1935%-148 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 79.9735%-139 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 79.8435%-149 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 79.3835%-139 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 79.2635%-142 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 79.1735%-142 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 78.6635%-146 - C1 -3TUZ - METN_ECOLI -
125 HHSearch 78.4035%-144 - C1 -3TUI - METN_ECOLI -
5 PsiBlast_PDB 77.4735%-147 - C1 -3TUJ - METN_ECOLI -
10 PsiBlast_PDB 77.2735%-135 - C1 -2OLK - ? -
9 PsiBlast_PDB 77.0135%-136 - C1 -2OLJ - ? -
11 PsiBlast_PDB 76.6735%-134 - C1 -2OUK - ? -
36 PsiBlast_CBE 76.4035%-127 - C1 -2OLK - ? -
28 PsiBlast_CBE 76.1735%-130 - C1 -3C41 - ? -
113 Fugue 76.0430%-127 - C1 -3TUZ - METN_ECOLI -
34 PsiBlast_CBE 75.9435%-129 - C1 -2OLK - ? -
13 PsiBlast_PDB 75.7235%-128 - C1 -3C4J - ? -
52 PsiBlast_CBE 66.7832%-125 - C1 -4U00 4.3 ?
72 PsiBlast_CBE 54.3833%-136 - C1 -1XEF 5.6 HLYBP_ECOLX
71 PsiBlast_CBE 54.0933%-129 - C1 -1XEF 5.7
91 PsiBlast_CBE 53.9331%-126 - C1 -3FVQ 5.3 FBPC_NEIG1
68 PsiBlast_CBE 53.9233%-128 - C1 -2FGJ 5.8 HLYBP_ECOLX
69 PsiBlast_CBE 53.8733%-123 - C1 -2FGJ 5.5 HLYBP_ECOLX
92 PsiBlast_CBE 53.7431%-127 - C1 -3FVQ 4.6 FBPC_NEIG1
57 PsiBlast_CBE 53.0834%-127 - C1 -2FF7 5.1
63 PsiBlast_CBE 52.9133%-121 - C1 -2FGK 6.0 HLYBP_ECOLX
73 PsiBlast_CBE 52.7833%-126 - C1 -1XEF 5.9 HLYBP_ECOLX
59 PsiBlast_CBE 52.7134%-134 - C1 -2PMK 5.3
66 PsiBlast_CBE 52.6833%-130 - C1 -2FGJ 5.4
62 PsiBlast_CBE 52.5533%-123 - C1 -2FGK 6.1 HLYBP_ECOLX
74 PsiBlast_CBE 52.1533%-128 - C1 -1XEF 4.9 HLYBP_ECOLX
64 PsiBlast_CBE 52.1233%-125 - C1 -2FFB 5.1
61 PsiBlast_CBE 51.9433%-121 - C1 -2FGK 5.4 HLYBP_ECOLX
67 PsiBlast_CBE 51.4833%-123 - C1 -2FGJ 5.5 HLYBP_ECOLX
70 PsiBlast_CBE 51.2133%-126 - C1 -2FFA 5.1
65 PsiBlast_CBE 51.2033%-131 - C1 -3B5J 5.3
60 PsiBlast_CBE 51.1333%-121 - C1 -2FGK 6.0
96 PsiBlast_CBE 45.6732%-118 - C1 -2ONJ 6.3 Y1866_STAAM
99 PsiBlast_CBE 45.5132%-118 - C1 -2HYD 4.5 Y1866_STAAM
97 PsiBlast_CBE 45.4432%-117 - C1 -2ONJ 6.2 Y1866_STAAM
98 PsiBlast_CBE 45.4132%-118 - C1 -2HYD 4.1 Y1866_STAAM
95 PsiBlast_CBE 44.6631%-123 - C1 -5DGX 5.1
110 PsiBlast_CBE 30.6032% - - C1 -3B5Z 2.3 MSBA_SALTY
108 PsiBlast_CBE 30.5932% - - C1 -3B5Z 2.3 MSBA_SALTY
109 PsiBlast_CBE 30.5632% - - C1 -3B5Z 2.9 MSBA_SALTY
107 PsiBlast_CBE 30.5532% - - C1 -3B5Z 2.5 MSBA_SALTY
111 PsiBlast_CBE 30.4932% - - C1 -3B5Y 1.9 MSBA_SALTY