@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13030: (2016-06-20 )
METPETRFCKESKVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAARHCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEHLMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRANERKNRKRHSQALANALGTDKPW

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_8(1Y7U)
?
[Raw transfer]




COA_A_8(1Y7U)
?
[Raw transfer]




COA_A_2(5EGJ)
?
[Raw transfer]




COA_A_2(5EGJ)
?
[Raw transfer]




COA_C_6(1VPM)
?
[Raw transfer]




COA_A_5(1VPM)
?
[Raw transfer]




COA_A_5(1VPM)
?
[Raw transfer]




COA_B_9(4IEN)
?
[Raw transfer]




COA_A_5(4IEN)
?
[Raw transfer]




COA_C_11(4IEN)
?
[Raw transfer]




COA_D_15(4IEN)
?
[Raw transfer]




CIT_A_8(3BJK)
Y827_HAEIN
[Raw transfer]




1 PsiBlast_PDB 85.4558% -91 - C2 -1Y7U 5.3 ?
52 HHSearch 82.6258% -82 - C2 -1Y7U 5.3 ?
51 HHSearch 80.9845% -97 - C2 -5EGJ 4.8 ?
4 PsiBlast_PDB 79.9449%-106 - C2 -5EGJ 4.8 ?
5 PsiBlast_PDB 79.8349%-108 - C2 -5HWF - ? -
2 PsiBlast_PDB 77.6950% -89 - C2 -4NCP - ? -
6 PsiBlast_PDB 77.4749% -97 - C2 -5EGK - ? -
3 PsiBlast_PDB 71.9048% -70 - C2 -3SPS - ? -
63 HHSearch 70.1436%-132 * C2 *2EIS - ? -
22 PsiBlast_CBE 70.0548% -72 - C2 -1VPM - ? -
21 PsiBlast_CBE 70.0448% -70 - C2 -1VPM 5.9 ?
7 PsiBlast_PDB 69.9848% -77 - C2 -1VPM 5.5 ?
54 HHSearch 69.5527%-108 - C2 -4IEN - ? -
56 HHSearch 69.2048% -74 - C2 -1VPM 5.5 ?
58 HHSearch 68.1435%-106 - C2 -4ZV3 - BACH_MOUSE -
57 HHSearch 67.8931% -99 - C2 -2QQ2 - BACH_HUMAN -
30 PsiBlast_CBE 67.6734%-131 - C2 -3BJK - Y827_HAEIN -
15 PsiBlast_PDB 66.7834%-133 - C2 -3BJK - Y827_HAEIN -
33 PsiBlast_CBE 66.5234%-130 - C2 -3BJK - Y827_HAEIN -
24 PsiBlast_CBE 66.4838%-127 - C2 -4ZV3 - BACH_MOUSE -
60 HHSearch 65.0631%-125 - C2 -3BJK 4.5 Y827_HAEIN
13 PsiBlast_PDB 63.8531%-102 - C2 -4IEN 5.4 ?
26 PsiBlast_CBE 62.6231%-103 - C2 -4IEN 5.8 ?
28 PsiBlast_CBE 62.2731%-102 - C2 -4IEN 5.4 ?
27 PsiBlast_CBE 61.3231%-100 - C2 -4IEN 5.1 ?