@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13170: (2016-06-20 )
MNHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFANKKEY

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMD_A_5(1WKQ)
GUAD_BACSU
[Raw transfer]



IMD_B_6(1WKQ)
GUAD_BACSU
[Raw transfer]



EDO_A_6(2G84)
?
[Raw transfer]



CHAIN_H_4(2B3J)
TADA_STAAM
[Raw transfer]
-
CHAIN_G_3(2B3J)
TADA_STAAM
[Raw transfer]
-
GOL_A_10(2B3J)
TADA_STAAM
[Raw transfer]



GOL_C_14(2B3J)
TADA_STAAM
[Raw transfer]



CHAIN_E_1(2B3J)
TADA_STAAM
[Raw transfer]
-
CHAIN_F_2(2B3J)
TADA_STAAM
[Raw transfer]
-
1 PsiBlast_PDB 84.26100%-104 - C7 -1WKQ - GUAD_BACSU -
103 HHSearch 83.90100%-104 - C7 -1WKQ 4.2 GUAD_BACSU
2 PsiBlast_PDB 83.3199%-111 - C7 -1TIY - GUAD_BACSU -
21 PsiBlast_CBE 82.37100%-100 - C7 -1WKQ 4.1 GUAD_BACSU
22 PsiBlast_CBE 81.2099%-108 - C7 -1TIY - GUAD_BACSU -
106 HHSearch 67.8428%-115 - C7 -2G84 3.1 ?
108 HHSearch 64.4732%-118 - C7 -1WWR - TADA_AQUAE -
104 HHSearch 64.0430%-120 - C7 -1Z3A - TADA_ECOLI -
125 Fugue 63.1430%-113 - C7 -2B3Z - RIBD_BACSU -
110 HHSearch 62.7330%-120 - C7 -2B3J - TADA_STAAM -
6 PsiBlast_PDB 61.6038%-122 - C7 -1Z3A - TADA_ECOLI -
29 PsiBlast_CBE 61.5038%-122 - C7 -1Z3A - TADA_ECOLI -
5 PsiBlast_PDB 60.9038%-119 - C7 -3OCQ - ? -
24 PsiBlast_CBE 60.5840%-110 - C7 -1WWR - TADA_AQUAE -
25 PsiBlast_CBE 60.4740%-109 - C7 -1WWR - TADA_AQUAE -
117 HHSearch 60.0533%-104 - C7 -2HXV - ? -
105 HHSearch 60.0427%-112 - C7 -2NX8 - TADA_STRP6 -
23 PsiBlast_CBE 59.8340%-114 - C7 -1WWR - TADA_AQUAE -
3 PsiBlast_PDB 59.2340%-110 - C7 -1WWR - TADA_AQUAE -
4 PsiBlast_PDB 58.5848%-175 - C7 -2B3J 3.1 TADA_STAAM
27 PsiBlast_CBE 58.3048%-173 - C7 -2B3J 1.8 TADA_STAAM
26 PsiBlast_CBE 57.8248%-168 - C7 -2B3J 3.2 TADA_STAAM
28 PsiBlast_CBE 57.1348%-173 - C7 -2B3J 3.1 TADA_STAAM