@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13180: (2016-06-20 )
MTTIKTSNLGFPRIGLNREWKKALEAYWKGSTDKDTFLKQIDELFLSAVKTQIDQQIDVVPVSDFTQYDHVLDTAVSFNWIPKRFRHLTDATDTYFAIARGIKDAVSSEMTKWFNTNYHYIVPEYDESIEFRLTRNKQLEDYRRIKQEYGVETKPVIVGPYTFVTLAKGYEPSEAKAIQKRLVPLYVQLLKELEEEGVKWVQIDEPALVTASSEDVRGAKELFESITSELSSLNVLLQTYFDSVDAYEELISYPVQGIGLDFVHDKGRNLEQLKTHGFPTDKVLAAGVIDGRNIWKADLEERLDAVLDILSIAKVDELWIQPSSSLLHVPVAKHPDEHLEKDLLNGLSYAKEKLAELTALKEGLVSGKAAISEEIQQAKADIQALKQFATGANSEQKKELEQLTDKDFKRPIPFEERLALQNESLGLPLLPTTTIGSFPQSAEVRSARQKWRKAEWSDEQYQNFINAETKRWIDIQEELELDVLVHGEFERTDMVEYFGEKLAGFAFTKYAWVQSYGSRCVRPPVIYGDVEFIEPMTVKDTVYAQSLTSKHVKGMLTGPVTILNWSFPRNDISRKEIAFQIGLALRKEVKALEDAGIQIIQVDEPALREGLPLKTRDWDEYLTWAAEAFRLTTSSVKNETQIHTHMCYSNFEDIVDTINDLDADVITIEHSRSHGGFLDYLKNHPYLKGLGLGVYDIHSPRVPSTEEMYNIIVDALAVCPTDRFWVNPDCGLKTRQQEETVAALKNMVEAAKQARAQQTQLV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

39S_A_6(4QQU)
METE_CANAL
[Raw transfer]



C2F_A_3(4L65)
METE_CANAL
[Raw transfer]



MTX_A_4(4L6H)
METE_CANAL
[Raw transfer]



MTX_A_4(4L6H)
METE_CANAL
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



GOL_A_5(4ZTX)
?
[Raw transfer]



HCS_A_3(4L6H)
METE_CANAL
[Raw transfer]



GLN_A_3(4L6O)
METE_CANAL
[Raw transfer]



TRS_A_12(4ZTY)
?
[Raw transfer]



MET_A_8(1U1H)
METE1_ARATH
[Raw transfer]



TRS_A_12(4ZTY)
?
[Raw transfer]
3 PsiBlast_PDB 84.2750% -70 - C4 -3T0C - METE_STRMU -
2 PsiBlast_PDB 83.8350% -72 - C4 -3L7R - METE_STRMU -
30 HHSearch 83.3744% -68 - C4 -4L6H 1.0 METE_CANAL
17 PsiBlast_PDB 83.0843% -68 - C4 -3PPH - METE_CANAL -
14 PsiBlast_PDB 83.0843% -67 - C4 -4L6H 4.9 METE_CANAL
13 PsiBlast_PDB 82.8643% -69 - C4 -4L65 5.9 METE_CANAL
7 PsiBlast_PDB 82.6945% -87 - C4 -3BQ6 - METE_THEMA -
8 PsiBlast_PDB 82.6643% -72 - C4 -4ZTX 2.3 ?
23 PsiBlast_CBE 82.4645% -88 - C4 -3BQ5 - METE_THEMA -
28 HHSearch 82.1852% -78 - C4 -2NQ5 - METE_STRMU -
22 PsiBlast_CBE 82.1145% -86 - C4 -3BQ6 - METE_THEMA -
9 PsiBlast_PDB 81.9143% -71 - C4 -4ZTY 2.5 ?
27 HHSearch 81.6943% -72 - C4 -4ZTY 2.5 ?
5 PsiBlast_PDB 81.6945% -84 - C4 -1T7L - METE_THEMA -
29 HHSearch 81.6846% -86 * C4 *1T7L - METE_THEMA -
16 PsiBlast_PDB 81.5643% -56 - C4 -4QQU 8.1 METE_CANAL
1 PsiBlast_PDB 81.5650% -75 - C4 -2NQ5 - METE_STRMU -
21 PsiBlast_CBE 81.5545% -83 - C4 -1XR2 - METE_THEMA -
11 PsiBlast_PDB 81.4043% -66 - C4 -3PPG - METE_CANAL -
24 PsiBlast_CBE 81.3145% -82 - C4 -1T7L - METE_THEMA -
15 PsiBlast_PDB 81.1643% -69 - C4 -4L6O 3.0 METE_CANAL
26 HHSearch 79.5344% -72 - C4 -1U1J 4.5 METE1_ARATH
47 Fugue 70.7540% -55 - C4 -1U1H 3.1 METE1_ARATH