@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13220: (2016-06-20 )
MQAFDELLTVEQLSFSYEEDEKPVFQDISFELQKGECVLLLGPSGCGKSSLALCLNGLYPEACDGIQSGHVFLFQKPVTDAETSETITQHAGVVFQDPDQQFCMLTVEDEIAFGLENLQIPKEEMTEKINAVLEKLRITHLKEKMISTLSGGQKQKVALACILAMEPELIILDEPTSLLDPFSAREFVHLMKDLQREKGFSLLVIEHQLDEWAPWIERTIVLDKSGKKALDGLTKNLFQHEAETLKKLGIAIPKVCHLQEKLSMPFTLSKEMLFKEPIPAGHVKKKKAPSGESVLEVSSLSFARGQQAIFKDISFSLREGSLTALVGPNGTGKSTLLSVLASLMKPQSGKILLYDQPLQKYKEKELRKRMGFVFQNPEHQFVTDTVYDELLFGQKANAETEKKAQHLLQRFGLAHLADHHPFAISQGQKRRLSVATMLMHDVKVLLLDEPTFGQDARTAAECMEMIQRIKAEGTAVLMITHDMELVSSYADSVLVLHDTGLAFDGSPAQLFSQETGLVQKAKLTLPLLYEWMAFQEEVRDEATVTSH

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]



ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]



ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]
77 HHSearch 87.6726%-123 - C1 -4F4C - PGP1_CAEEL -
76 HHSearch 77.4524% -98 - C3 -4FIN - ETTA_ECOLI -
80 HHSearch 71.1722%-115 - C4 -2IW3 - EF3A_YEAST -
5 PsiBlast_PDB 70.2334%-122 - C6 -4MKI - ECFA2_CALS4 -
21 PsiBlast_CBE 69.6334%-123 - C6 -4MKI - ECFA2_CALS4 -
32 PsiBlast_CBE 66.8431%-136 - C6 -2AWN - MALK_ECOLI -
2 PsiBlast_PDB 65.9434% -94 - C6 -4HZU - ECFA1_LACBA -
14 PsiBlast_PDB 65.8631%-136 - C6 -3PUY - MALK_ECOLI -
19 PsiBlast_PDB 65.8131%-136 - C6 -3PUX - MALK_ECOLI -
82 HHSearch 65.5122%-106 - C5 -1YQT - ? -
66 Fugue 65.4520% -78 - C5 -1YQT - ? -
17 PsiBlast_PDB 65.4031%-137 - C6 -3PUV - MALK_ECOLI -
3 PsiBlast_PDB 65.2933%-138 - C6 -3GFO - ECFA3_CLOP1 -
1 PsiBlast_PDB 65.2634% -92 - C6 -4HUQ - ECFA1_LACBA -
79 HHSearch 64.8021%-107 - C5 -3BK7 - ? -
20 PsiBlast_PDB 64.7331%-139 - C6 -3RLF - MALK_ECOLI -
36 PsiBlast_CBE 64.2831%-135 - C6 -2R6G - MALK_ECOLI (first) -
37 PsiBlast_CBE 64.0331%-130 - C6 -2R6G - MALK_ECOLI (first) -
18 PsiBlast_PDB 63.9031%-133 - C6 -3PUW - MALK_ECOLI -
16 PsiBlast_PDB 63.3531%-131 - C6 -3PV0 - MALK_ECOLI -
47 PsiBlast_CBE 58.9031%-111 - C6 -4U00 4.3 ?
49 PsiBlast_CBE 54.7131%-113 - C6 -4AYX 3.6 ABCBA_HUMAN
50 PsiBlast_CBE 52.6131%-109 - C6 -4AYT 4.2 ABCBA_HUMAN
53 PsiBlast_CBE 52.5632%-147 - C6 -1G6H 4.4 LIVG_METJA
56 PsiBlast_CBE 47.1232%-153 - C6 -1G9X 3.6 LIVG_METJA
55 PsiBlast_CBE 44.8732%-138 - C6 -1G9X 2.6 LIVG_METJA
57 PsiBlast_CBE 44.6632%-136 - C6 -1G9X 3.2 LIVG_METJA