@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13240: (2016-06-20 )
MEHICGTSRIAGFRFSLYPMTDDFISVIKSALKKTDTSKVWTKTDHISTVLRGSIDHVFDAAKAIYLHAANSEQHIVMNGTFSIGCPGDTQGDTYLSKGDKRVNEDAVRGLKAEAPCQFALYPMNEPDYMGLIMEAVDIAKAQGTFVQGVHYASELDGDAHDVFSTLEAVFRMAEQQTNHITMTVNLSANSPSRKNRKQG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VIB_A_5(1SBR)
YKOF_BACSU
[Raw transfer]




4 HHSearch 92.5999%-110 - C4 -1S99 - YKOF_BACSU -
2 PsiBlast_PDB 91.7695%-110 - C4 -1S99 - YKOF_BACSU -
19 Fugue 90.43100%-101 - C4 -1S7H - YKOF_BACSU -
1 PsiBlast_PDB 90.43100%-101 - C4 -1S7H - YKOF_BACSU -
3 PsiBlast_PDB 89.1195%-109 - C4 -1SBR 4.3 YKOF_BACSU
17 HHSearch 48.2914%-155 - C4 -1VK8 - ? -
12 HHSearch 46.2518%-117 - C4 -2EPI - Y1052_METJA -
15 HHSearch 45.6215%-139 - C4 -1LXN - Y1187_METTH -
11 HHSearch 45.4225%-130 - C4 -1S99 - YKOF_BACSU -
27 Fugue 43.4916% -85 * C4 *2EPI - Y1052_METJA -
13 HHSearch 43.2013%-158 - C4 -1LXJ - ECM15_YEAST -
7 HHSearch 43.1011%-162 - C4 -1VK8 - ? -
8 HHSearch 42.398%-122 - C4 -2EPI - Y1052_METJA -
5 HHSearch 41.596%-162 - C4 -1LXJ - ECM15_YEAST -
9 HHSearch 41.0111%-140 - C4 -1LXN - Y1187_METTH -
23 Fugue 37.459%-108 - C5 -3P2H - ? -
20 Fugue 33.9419%-104 - C- -4H3W - ? -
28 Fugue 30.9711% -67 - C4 -4H5B - ? -
16 HHSearch 28.5021% 33 - C4 -2IBO - ? -
18 HHSearch 28.2419%-230 - C4 -5CW9 - ? -