@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13260: (2016-06-20 )
MKLKTKIHLYTSISLLILLILVHTAVYLIFSSALTSKDAARLADETDNIAEALRAAETEGVALQDMLQAYLPANGMVRVVNGDQKAVMTITKEKAYKDFPLSFHSGETADVRKPDGKLFAEAAVPVIWTDGQVVSLQLVERLENTEESLFLLKIILIAASAAVCIASFFAGSLLARRIINPIRRLMITMKDIQRDKEFKTISLEGQSNDELYQMGLTFNEMAMMLKEHYDKQQQFVQDASHELKTPLTIIESYSSLMKRWGAKKPEVLEESIEAIHSEAVHMKKLTNQLLALAKSHQGLEVDLKTIDLIKAARAVMQTLQSVYQRDILLETDKESLLVKADEERIKQLLTILLDNAIKYSEKPIEMSAGTRNGRPFLSVRDEGIGIPEEHIPHLFERFYRADEARNRKTGGTGLGLSIAKQIADEHGIELSVKSKPGQGTAVTMQFSEQNGGGR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AN2_B_4(4U7O)
?
[Raw transfer]




ADP_A_8(4JAV)
?
[Raw transfer]




ADP_A_7(3DGE)
?
[Raw transfer]




ADP_A_3(4JAS)
?
[Raw transfer]




ADP_A_2(4JAU)
?
[Raw transfer]




AN2_A_3(4U7O)
?
[Raw transfer]




ADP_A_2(2C2A)
?
[Raw transfer]




AN2_A_3(4U7O)
?
[Raw transfer]




87 HHSearch 87.6631%-117 - C3 -4U7O 6.5 ?
2 PsiBlast_PDB 80.5932% -93 - C3 -4U7O 6.5 ?
4 PsiBlast_PDB 80.1330%-104 - C3 -4JAS 8.8 ?
5 PsiBlast_PDB 76.8030%-118 - C3 -4JAU 6.1 ?
72 Fugue 76.4722% -64 - C4 -4I5S - ? -
6 PsiBlast_PDB 76.3730% -99 - C3 -3DGE 6.7 ?
7 PsiBlast_PDB 75.0530%-103 - C3 -4JAV 8.6 ?
1 PsiBlast_PDB 75.0532%-103 - C3 -4U7N - ? -
8 PsiBlast_PDB 74.2830%-114 - C3 -2C2A 7.8 ?
21 PsiBlast_CBE 72.9532% -62 - C3 -4U7O 9.5 ?
89 HHSearch 72.5128%-120 - C3 -2C2A - ? -
18 PsiBlast_PDB 71.3828% -87 - C3 -4Q20 - DIVL_CAUCR -
80 HHSearch 69.2325% -85 - C3 -4BIX - CPXA_ECOLI -
86 HHSearch 69.1826% -85 - C3 -4Q20 - DIVL_CAUCR -
77 Fugue 67.0616% -85 - C4 -1JM6 - PDK2_RAT -
3 PsiBlast_PDB 66.5631% -78 - C3 -4I5S - ? -
81 HHSearch 66.2729% -68 - C4 -4I5S - ? -
91 HHSearch 65.7828% -94 - C3 -3A0R - ? -
85 HHSearch 65.2714%-104 - C4 -2Q8G - PDK1_HUMAN -
75 Fugue 64.6514% -90 * C4 *1GKZ - BCKD_RAT -