@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13880: (2016-06-21 )
MNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLLLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(3RIO)
GLCT_BACSU
[Raw transfer]



GOL_A_4(3RIO)
GLCT_BACSU
[Raw transfer]
1 PsiBlast_PDB 87.4999%-115 - C1 -3RIO 3.0 GLCT_BACSU
16 HHSearch 86.4198%-117 - C1 -3RIO 3.0 GLCT_BACSU
14 PsiBlast_CBE 69.24100%-212 - C1 -3UFE - -
4 PsiBlast_PDB 68.3831%-152 - C1 -1TLV - LICT_BACSU -
17 HHSearch 67.7631%-140 - C1 -1H99 - LICT_BACSU -
29 Fugue 67.3430%-132 - C1 -1H99 - LICT_BACSU -
15 PsiBlast_CBE 66.70100%-194 - C1 -3GWH - -
5 PsiBlast_PDB 66.6730%-137 - C1 -1H99 - LICT_BACSU -
21 HHSearch 64.5094%-177 - C1 -3UFE - GLCT_BACSU -
3 PsiBlast_PDB 63.67100%-152 - C1 -3UFE - GLCT_BACSU -
2 PsiBlast_PDB 63.21100%-181 - C1 -3GWH - GLCT_BACSU -
22 HHSearch 53.8518%-184 - C1 -3RIO - GLCT_BACSU -
23 HHSearch 49.1120%-171 - C1 -3UFE - GLCT_BACSU -
24 HHSearch 47.9017%-181 - C1 -3NUF - ? -
25 HHSearch 45.4814%-181 * C1 *1H99 - LICT_BACSU -
33 Fugue 43.5018%-159 - C1 -2JQ4 - AACP_AGRFC -
28 HHSearch 41.3714%-199 - C1 -4R6I - ATXA_BACAN -
8 PsiBlast_PDB 39.9727%-150 - C1 -1UDD - ? -
31 Fugue 35.5132%-129 - C1 -1L1C - LICT_BACSU -
26 HHSearch 35.2714%-147 - C1 -3NUF - ? -