@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14290: (2016-06-22 )
MALVRPFPIVQVVGFQNSGKTTFIERILEKASEQGVHLGCLKHHGHGGEPQTLTEGKDTDRYKAAGADVTAVEGAGVLQLTARRNWDLARLIELYQFLETDCLLIEGFKKAPYPKVVILSEKEDLEALQAVNIIAIIYRKKEHMTEHQGLPVFHADDPVAVDFVLSQLKGESA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_C_2(3E70)
?
[Raw transfer]




25 PsiBlast_CBE 91.5093%-167 - C2 -4NKR - ? -
63 Fugue 90.9492%-197 - C2 -4NKR - ? -
28 PsiBlast_CBE 90.1493%-196 - C2 -4NKR - ? -
22 PsiBlast_CBE 89.1293%-193 - C2 -4OYH - ? -
24 PsiBlast_CBE 88.8093%-187 - C2 -4OYH - ? -
21 PsiBlast_CBE 88.6193%-188 - C2 -4OYH - ? -
26 PsiBlast_CBE 88.1493%-190 - C2 -4NKR - ? -
23 PsiBlast_CBE 87.5893%-193 - C2 -4OYH - ? -
2 PsiBlast_PDB 87.3593%-191 - C2 -4NKR - ? -
27 PsiBlast_CBE 87.2993%-194 - C2 -4NKR - ? -
1 PsiBlast_PDB 87.2793%-190 - C2 -4OYH - ? -
41 HHSearch 86.2290%-192 - C2 -4NKR - ? -
3 PsiBlast_PDB 67.1442%-168 - C2 -1XJC - ? -
44 HHSearch 64.5930%-198 - C2 -2F1R - ? -
4 PsiBlast_PDB 62.7529%-196 - C2 -2F1R - ? -
64 Fugue 61.5622%-211 - C2 -1NP6 - MOBB_ECOLI -
42 HHSearch 59.7222%-201 - C2 -1NP6 - MOBB_ECOLI -
66 Fugue 53.0319%-144 - C2 -2HF9 - HYPB_METJA -
5 PsiBlast_PDB 52.6225%-209 - C2 -1NP6 - MOBB_ECOLI -
68 Fugue 50.3222%-128 - C2 -2WSM - ? -