@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14360: (2016-06-22 )
MIQLSNVRKSYQIGKETFDVLHSIDLDIHQGEYVSIMGPSGSGKSTIMNIIGCLDRPTSGTYQLDGEDISSYKDKELAAVRNRSIGFVFQQFQLLPRLNAKKNVELPMIYSGIGKKERQERAERALEKVGLADRMLHMPNELSGGQKQRVAIARAIVNEPKLILADEPTGALDTKTSEAIMDQFTALNAEGTTIVLVTHEPEVADCTNRIVMVRDGNIVPASSGQRSVGE

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




21 PsiBlast_CBE 78.1652%-110 - C1 -1L2T - Y796_METJA -
1 PsiBlast_PDB 77.8452%-104 - C1 -1L2T - Y796_METJA -
22 PsiBlast_CBE 77.1651%-113 - C1 -3TIF - Y796_METJA -
3 PsiBlast_PDB 77.1151% -98 - C1 -1F3O - Y796_METJA -
2 PsiBlast_PDB 76.4651%-105 - C1 -3TIF - Y796_METJA -
31 PsiBlast_CBE 75.6941%-125 - C1 -4YMU - ? -
8 PsiBlast_PDB 74.2237%-139 - C1 -3TUZ - METN_ECOLI -
14 PsiBlast_PDB 73.3841%-120 - C1 -4YMW - ? -
27 PsiBlast_CBE 73.2937%-140 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 72.8841%-120 - C1 -4YMS - ? -
30 PsiBlast_CBE 72.6341%-122 - C1 -4YMV - ? -
11 PsiBlast_PDB 71.8841%-121 - C1 -4YMT - ? -
12 PsiBlast_PDB 71.7941%-119 - C1 -4YMU - ? -
87 PsiBlast_CBE 70.2537%-130 - C1 -1B0U 4.4 HISP_SALTY
7 PsiBlast_PDB 69.9637%-132 - C1 -3TUI - METN_ECOLI -
13 PsiBlast_PDB 69.7341%-122 - C1 -4YMV - ? -
6 PsiBlast_PDB 69.6538%-133 - C1 -3DHW - METN_ECOLI -
25 PsiBlast_CBE 69.5237%-135 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 69.4037%-140 - C1 -3TUZ - METN_ECOLI -
9 PsiBlast_PDB 68.3637%-137 - C1 -3TUJ - METN_ECOLI -
98 PsiBlast_CBE 59.0336%-114 - C1 -3FVQ 7.6 FBPC_NEIG1
93 PsiBlast_CBE 58.7233%-131 - C1 -3NHA 6.5
99 PsiBlast_CBE 58.1336%-116 - C1 -3FVQ 7.6 FBPC_NEIG1
94 PsiBlast_CBE 58.0333%-128 - C1 -3NH9 6.1
92 PsiBlast_CBE 57.1833%-138 - C1 -3NHB 6.5
97 PsiBlast_CBE 53.3733%-121 - C1 -4MKI 2.0 ECFA2_CALS4
96 PsiBlast_CBE 51.4433%-118 - C1 -4MKI 2.2 ECFA2_CALS4
112 HHSearch 47.2934%-112 - C1 -3FVQ 7.6 FBPC_NEIG1