@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14670: (2016-06-23 )
MTNWTEIDEIAKKWIREAGARITQSMHESLTIETKSNPNDLVTNIDKETEKFFIDRIQETFPGHRILGEEGQGDKIHSLEGVVWIIDPIDGTMNFVHQQRNFAISIGIFENGEGKIGLIYDVVHDELYHAFSGRGAYMNETKLAPLKETVIEEAILAINATWVTENRRIDQSVLAPLVKRVRGTRSYGSAALELANVAAGRIDAYITMRLAPWDYAAGCVLLNEVGGTYTTIEGEPFTFLENHSVLAGNPSIHKTIFEEYLHARK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LIP_A_4(1IMB)
IMPA1_HUMAN
[Raw transfer]




LIP_B_6(1IMB)
IMPA1_HUMAN
[Raw transfer]




2AM_A_4(5DW8)
?
[Raw transfer]




2AM_A_4(5DW8)
?
[Raw transfer]




IPD_A_4(1IMA)
IMPA1_HUMAN
[Raw transfer]




IPD_B_11(1AWB)
IMPA1_HUMAN
[Raw transfer]




IPD_B_6(1IMA)
IMPA1_HUMAN
[Raw transfer]




2AM_B_9(5DW8)
?
[Raw transfer]




GOL_B_15(4AS4)
IMPA1_HUMAN
[Raw transfer]




SRT_H_8(2P3V)
BSUHB_THEMA
[Raw transfer]




GOL_A_7(4AS4)
IMPA1_HUMAN
[Raw transfer]




SRT_E_5(2P3V)
BSUHB_THEMA
[Raw transfer]




SRT_G_7(2P3V)
BSUHB_THEMA
[Raw transfer]




SRT_F_6(2P3V)
BSUHB_THEMA
[Raw transfer]




PG4_A_8(3T0J)
?
[Raw transfer]




GD_A_3(1IMA)
IMPA1_HUMAN
[Raw transfer]




GD_A_3(1IMB)
IMPA1_HUMAN
[Raw transfer]




60 HHSearch 90.8450%-130 - C6 -5DW8 4.3 ?
22 PsiBlast_CBE 90.6150%-130 - C6 -3T0J - ? -
24 PsiBlast_CBE 89.9350%-129 - C6 -3T0J - ? -
1 PsiBlast_PDB 89.6350%-126 - C6 -3T0J 2.2 ?
23 PsiBlast_CBE 89.5750%-126 - C6 -3T0J - ? -
21 PsiBlast_CBE 89.2050%-135 - C6 -5DW8 4.9 ?
2 PsiBlast_PDB 88.2750%-128 - C6 -5DW8 4.3 ?
25 PsiBlast_CBE 84.2534%-121 - C6 -4AS5 - IMPA1_MOUSE -
3 PsiBlast_PDB 83.9234%-121 - C6 -4AS5 - IMPA1_MOUSE -
26 PsiBlast_CBE 83.6534%-121 - C6 -4AS5 - IMPA1_MOUSE -
27 PsiBlast_CBE 83.5834%-122 - C6 -4AS5 - IMPA1_MOUSE -
62 HHSearch 83.3931%-128 - C6 -4I3Y - ? -
4 PsiBlast_PDB 81.7233%-122 - C6 -1IMA 3.5 IMPA1_HUMAN
7 PsiBlast_PDB 81.6333%-122 - C6 -1IMD - IMPA1_HUMAN -
35 PsiBlast_CBE 81.6033%-125 - C6 -1AWB 2.6 IMPA1_HUMAN
8 PsiBlast_PDB 81.3533%-127 - C6 -1IME - IMPA1_HUMAN -
5 PsiBlast_PDB 81.2533%-120 - C6 -1IMB 2.8 IMPA1_HUMAN
29 PsiBlast_CBE 81.1933%-122 - C6 -1IME - IMPA1_HUMAN -
30 PsiBlast_CBE 81.1533%-123 - C6 -1IMD - IMPA1_HUMAN -
31 PsiBlast_CBE 81.0833%-121 - C6 -1IMC - IMPA1_HUMAN -
32 PsiBlast_CBE 80.9433%-123 - C6 -1IMB 2.7 IMPA1_HUMAN
9 PsiBlast_PDB 80.6833%-122 - C6 -4AS4 3.5 IMPA1_HUMAN
33 PsiBlast_CBE 80.4933%-124 - C6 -1IMA 3.4 IMPA1_HUMAN
28 PsiBlast_CBE 80.4533%-122 - C6 -4AS4 3.4 IMPA1_HUMAN
38 PsiBlast_CBE 73.6433%-110 - C6 -2P3V 1.2 BSUHB_THEMA
15 PsiBlast_PDB 73.6333%-107 - C6 -2P3V 3.0 BSUHB_THEMA
39 PsiBlast_CBE 72.2433%-107 - C6 -2P3V 3.1 BSUHB_THEMA
37 PsiBlast_CBE 70.9433%-105 - C6 -2P3V 3.0 BSUHB_THEMA