@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14860: (2016-06-23 )
MSQQSIQKVLVANRGEIAIRIFRACTELNIRTVAVYSKEDSGSYHRYKADEAYLVGEGKKPIDAYLDIEGIIDIAKRNKVDAIHPGYGFLSENIHFARRCEEEGIVFIGPKSEHLDMFGDKVKAREQAEKAGIPVIPGSDGPAETLEAVEQFGQANGYPIIIKASLGGGGRGMRIVRSESEVKEAYERAKSEAKAAFGNDEVYVEKLIENPKHIEVQVIGDKQGNVVHLFERDCSVQRRHQKVIEVAPSVSLSPELRDQICEAAVALAKNVNYINAGTVEFLVANNEFYFIEVNPRVQVEHTITEMITGVDIVQTQILVAQGHSLHSKKVNIPEQKDIFTIGYAIQSRVTTEDPQNDFMPDTGKIMAYRSGGGFGVRLDTGNSFQGAVITPYYDSLLVKLSTWALTFEQAAAKMVRNLQEFRIRGIKTNIPFLENVAKHEKFLTGQYDTSFIDTTPELFNFPKQKDRGTKMLTYIGNVTVNGFPGIGKKEKPAFDKPLGVKVDVDQQPARGTKQILDEKGAEGLANWVKEQKSVLLTDTTFRDAHQSLLATRIRSHDLKKIANPTAALWPELFSMEMWGGATFDVAYRFLKEDPWKRLEDLRKEVPNTLFQMLLRSSNAVGYTNYPDNVIKEFVKQSAQSGIDVFRIFDSLNWVKGMTLAIDAVRDTGKVAEAAICYTGDILDKNRTKYDLAYYTSMAKELEAAGAHILGIKDMAGLLKPQAAYELVSALKETIDIPVHLHTHDTSGNGIYMYAKAVEAGVDIIDVAVSSMAGLTSQPSASGFYHAMEGNDRRPEMNVQGVELLSQYWESVRKYYSEFESGMKSPHTEIYEHEMPGGQYSNLQQQAKGVGLGDRWNEVKEMYRRVNDMFGDIVKVTPSSKVVGDMALYMVQNNLTEKDVYEKGESLDFPDSVVELFKGNIGQPHGGFPEKLQKLILKGQEPITVRPGELLEPVSFEAIKQEFKEQHNLEISDQDAVAYALYPKVFTDYVKTTESYGDISVLDTPTFFYGMTLGEEIEVEIERGKTLIVKLISIGEPQPDATRVVYFELNGQPREVVIKDESIKSSVQERLKADRTNPSHIAASMPGTVIKVLAEAGTKVNKGDHLMINEAMKMETTVQAPFSGTIKQVHVKNGEPIQTGDLLLEIEKA

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




25 PsiBlast_CBE 76.0564% -82 - C2 -3HO8 - ? -
36 PsiBlast_CBE 75.6463% -84 - C2 -3HB9 - ? -
26 PsiBlast_CBE 75.2264% -82 - C2 -3HO8 - ? -
42 PsiBlast_CBE 75.1563% -84 - C2 -4HNT - ? -
32 PsiBlast_CBE 73.9263% -80 - C2 -4HNU - ? -
30 PsiBlast_CBE 73.7463% -81 - C2 -4HNU - ? -
44 PsiBlast_CBE 73.7263% -80 - C2 -4HNT - ? -
4 PsiBlast_PDB 73.5064% -78 - C2 -3HO8 - ? -
23 PsiBlast_CBE 71.8867% -83 - C2 -4QSH - ? -
2 PsiBlast_PDB 71.8467% -84 - C2 -4QSK - ? -
21 PsiBlast_CBE 71.5767% -84 - C2 -4QSK - ? -
22 PsiBlast_CBE 71.0867% -82 - C2 -4QSH - ? -
3 PsiBlast_PDB 70.5367% -82 - C2 -4QSH - ? -
120 HHSearch 70.2868% -81 - C2 -4QSH - ? -
5 PsiBlast_PDB 70.2064% -77 - C2 -3BG5 - ? -
119 HHSearch 69.7064% -79 - C2 -3HBL - ? -
9 PsiBlast_PDB 69.5763% -79 - C2 -3HBL - ? -
1 PsiBlast_PDB 69.3667% -83 - C2 -4QSL - ? -
37 PsiBlast_CBE 69.3463% -81 - C2 -3HB9 - ? -
7 PsiBlast_PDB 68.7263% -77 - C2 -4HNV - ? -
60 PsiBlast_CBE 50.0546% -87 - C2 -2W6Z 4.6 ACCC_ECOLI
62 PsiBlast_CBE 49.8946% -87 - C2 -2W6Q 4.4 ACCC_ECOLI
20 PsiBlast_PDB 49.8446% -91 - C2 -2VR1 4.2 ACCC_ECOLI
72 PsiBlast_CBE 49.8346% -88 - C2 -2V5A 5.9 ACCC_ECOLI
63 PsiBlast_CBE 49.7246% -88 - C2 -2W6P 5.4 ACCC_ECOLI
58 PsiBlast_CBE 49.7146% -88 - C2 -2W70 3.8 ACCC_ECOLI
55 PsiBlast_CBE 49.5046% -86 - C2 -2W71 6.4 ACCC_ECOLI
56 PsiBlast_CBE 49.4646% -85 - C2 -2W71 6.4 ACCC_ECOLI
82 PsiBlast_CBE 49.3046% -85 - C2 -3G8C 6.0 ACCC_ECOLI
74 PsiBlast_CBE 49.3046% -87 - C2 -2V59 5.1 ACCC_ECOLI
67 PsiBlast_CBE 49.2446% -85 - C2 -2W6N 5.5 ACCC_ECOLI
137 HHSearch 49.2044% -85 - C2 -3OUZ 7.3 ?
86 PsiBlast_CBE 49.1946% -85 - C2 -3G8D 5.2 ACCC_ECOLI
69 PsiBlast_CBE 49.1146% -85 - C2 -2W6M 3.7 ACCC_ECOLI
76 PsiBlast_CBE 48.9046% -85 - C2 -2V58 5.8 ACCC_ECOLI
19 PsiBlast_PDB 48.7346% -86 - C2 -2J9G 5.7 ACCC_ECOLI
88 PsiBlast_CBE 48.5146% -85 - C2 -3RV4 8.1 ACCC_ECOLI
65 PsiBlast_CBE 48.4346% -88 - C2 -2W6O 3.8 ACCC_ECOLI
49 PsiBlast_CBE 48.3946% -84 - C2 -3JZI 9.2 ACCC_ECOLI
66 PsiBlast_CBE 48.1346% -85 - C2 -2W6N 5.6 ACCC_ECOLI
64 PsiBlast_CBE 48.1146% -88 - C2 -2W6O 3.3 ACCC_ECOLI
68 PsiBlast_CBE 48.0946% -86 - C2 -2W6M 3.8 ACCC_ECOLI
50 PsiBlast_CBE 47.9746% -84 - C2 -3JZF 9.5 ACCC_ECOLI
57 PsiBlast_CBE 47.9346% -85 - C2 -2W70 3.6 ACCC_ECOLI
89 PsiBlast_CBE 47.8447% -93 - C2 -4RZQ 4.0 ACCC_HAEIN
73 PsiBlast_CBE 47.8446% -86 - C2 -2V59 5.1 ACCC_ECOLI
16 PsiBlast_PDB 47.7746% -83 - C2 -3JZI 8.4 ACCC_ECOLI
61 PsiBlast_CBE 47.6346% -85 - C2 -2W6Q 4.4 ACCC_ECOLI
93 PsiBlast_CBE 47.6247% -91 - C2 -4MV3 4.1 ACCC_HAEIN
75 PsiBlast_CBE 47.5846% -85 - C2 -2V58 6.0 ACCC_ECOLI
80 PsiBlast_CBE 47.1546% -86 - C2 -3RUP 6.8 ACCC_ECOLI
77 PsiBlast_CBE 47.1546% -88 - C2 -2J9G 7.4 ACCC_ECOLI
79 PsiBlast_CBE 46.7646% -86 - C2 -3RV3 7.7 ACCC_ECOLI
94 PsiBlast_CBE 46.3947% -91 - C2 -4MV1 4.5 ACCC_HAEIN
138 HHSearch 46.2147% -84 - C2 -4MV4 4.3 ACCC_HAEIN
85 PsiBlast_CBE 46.1746% -87 - C2 -1DV2 5.9 ACCC_ECOLI
84 PsiBlast_CBE 46.0946% -83 - C2 -1DV2 4.1 ACCC_ECOLI
83 PsiBlast_CBE 46.0046% -84 - C2 -3G8C 5.8 ACCC_ECOLI
78 PsiBlast_CBE 46.0046% -88 - C2 -3RV3 6.3 ACCC_ECOLI
97 PsiBlast_CBE 45.9644% -78 - C2 -2VQD 7.5 ACCC_PSEAE
81 PsiBlast_CBE 45.9146% -83 - C2 -3RUP 7.9 ACCC_ECOLI
48 PsiBlast_CBE 45.8445% -83 - C2 -2VPQ 6.2 ?
92 PsiBlast_CBE 45.6447% -85 - C2 -4MV4 4.3 ACCC_HAEIN
14 PsiBlast_PDB 45.4845% -81 - C2 -2VPQ 7.1 ?
136 HHSearch 45.2046% -79 - C2 -2VPQ 6.6 ?
91 PsiBlast_CBE 44.8947% -86 - C2 -4MV8 4.7 ACCC_HAEIN
106 PsiBlast_CBE 38.4735% -83 - C2 -3VA7 2.1 ?
125 HHSearch 36.8935% -79 - C2 -3VA7 2.1 ?