@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15300: (2016-06-23 )
MRSKKLWISLLFALTLIFTMAFSNMSAQAAGKSSTEKKYIVGFKQTMSAMSSAKKKDVISEKGGKVQKQFKYVNAAAATLDEKAVKELKKDPSVAYVEEDHIAHEYAQSVPYGISQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLNVRGGASFVPSETNPYQDGSSHGTHVAGTIAALNNSIGVLGVSPSASLYAVKVLDSTGSGQYSWIINGIEWAISNNMDVINMSLGGPSGSTALKTVVDKAVSSGIVVAAAAGNEGSSGSSSTVGYPAKYPSTIAVGAVNSSNQRASFSSAGSELDVMAPGVSIQSTLPGGTYGAYNGTSMATPHVAGAAALILSKHPTWTNAQVRDRLESTATYLGNSFYYGKGLINVQAAAQ

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_E_5(1Y33)
SUBT_BACAM
[Raw transfer]




CIT_E_5(1Y3C)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y3C)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y34)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TM3)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TM7)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TM5)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TM1)
?
[Raw transfer]




CIT_E_6(1TMG)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y1K)
?
[Raw transfer]




CIT_E_6(1Y33)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y3D)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TM4)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y3B)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y3F)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1Y48)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TO2)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TO2)
SUBT_BACAM
[Raw transfer]




CIT_E_6(1TO1)
SUBT_BACAM
[Raw transfer]




101 HHSearch 86.8099% -72 - C2 -3WHI - ? -
1 PsiBlast_PDB 86.2395% -73 - C2 -3WHI - ? -
21 PsiBlast_CBE 85.8795% -77 - C2 -3WHI - ? -
23 PsiBlast_CBE 79.5485% -93 - C2 -1AQN - SUBT_BACAM -
7 PsiBlast_PDB 79.5386% -86 - C2 -1YJC - SUBT_BACAM -
16 PsiBlast_PDB 79.3986% -92 - C2 -1SBI - SUBT_BACAM -
3 PsiBlast_PDB 79.3798% -85 - C2 -1MEE - SUBT_BACPU -
22 PsiBlast_CBE 79.1485% -92 - C2 -1AU9 - SUBT_BACAM -
18 PsiBlast_PDB 79.1186% -90 - C2 -1AK9 - SUBT_BACAM -
6 PsiBlast_PDB 79.0386% -91 - C2 -1SBH - SUBT_BACAM -
2 PsiBlast_PDB 78.9798% -81 - C2 -1SCJ - SUBT_BACSU -
20 PsiBlast_PDB 78.7586% -90 - C2 -1S01 - SUBT_BACAM -
5 PsiBlast_PDB 78.7586% -90 - C2 -1YJA - ? -
14 PsiBlast_PDB 78.4486% -88 - C2 -2ST1 - ? -
4 PsiBlast_PDB 78.2486% -85 - C2 -1YJB - SUBT_BACAM -
15 PsiBlast_PDB 77.2686% -87 - C2 -2SNI - SUBT_BACAM -
24 PsiBlast_CBE 77.1386% -89 - C2 -1Y4D - SUBT_BACAM -
17 PsiBlast_PDB 76.8386% -86 - C2 -1S02 - SUBT_BACAM -
32 PsiBlast_CBE 76.8086% -90 - C2 -1Y33 3.5 SUBT_BACAM
13 PsiBlast_PDB 76.8086% -89 - C2 -1SUP - SUBT_BACAM -
29 PsiBlast_CBE 76.6986% -88 - C2 -1Y3C 3.5 SUBT_BACAM
41 PsiBlast_CBE 76.4786% -89 - C2 -1TM1 2.9 ?
110 HHSearch 76.4687% -88 * C2 *1TO2 3.0 SUBT_BACAM
36 PsiBlast_CBE 76.4586% -88 - C2 -1TMG 3.0 SUBT_BACAM
26 PsiBlast_CBE 76.3986% -87 - C2 -1Y48 3.0 SUBT_BACAM
31 PsiBlast_CBE 76.3386% -86 - C2 -1Y34 2.9 SUBT_BACAM
33 PsiBlast_CBE 76.2986% -86 - C2 -1Y1K 2.9 ?
39 PsiBlast_CBE 76.2886% -88 - C2 -1TM4 2.9 SUBT_BACAM
28 PsiBlast_CBE 76.2886% -88 - C2 -1Y3D 3.0 SUBT_BACAM
37 PsiBlast_CBE 76.2686% -88 - C2 -1TM7 2.9 SUBT_BACAM
30 PsiBlast_CBE 76.2686% -87 - C2 -1Y3B 3.0 SUBT_BACAM
35 PsiBlast_CBE 76.1086% -87 - C2 -1TO1 1.4 SUBT_BACAM
34 PsiBlast_CBE 76.0886% -87 - C2 -1TO2 2.8 SUBT_BACAM
38 PsiBlast_CBE 75.9886% -88 - C2 -1TM5 2.9 SUBT_BACAM
40 PsiBlast_CBE 75.9586% -87 - C2 -1TM3 2.9 SUBT_BACAM
27 PsiBlast_CBE 75.9186% -86 - C2 -1Y3F 2.8 SUBT_BACAM