@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15490: (2016-06-24 )
MKHLTTMSELSTEEIKDLLQTAQELKSGKTDNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRALQTNVKRGEAAYVISH

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_A_5(4KH1)
?
[Raw transfer]




PAL_A_5(4KH0)
?
[Raw transfer]




6PR_A_8(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGV)
?
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_C_11(4KH1)
?
[Raw transfer]




PAL_A_5(4KGX)
?
[Raw transfer]




PAL_A_5(4F04)
PYRB_ECOLI
[Raw transfer]




6PR_C_7(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_10(4KH0)
?
[Raw transfer]




PAL_C_8(4KGX)
?
[Raw transfer]




PAL_B_7(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGV)
?
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]




1IP_A_7(2IPO)
PYRB_ECOLI
[Raw transfer]




1IP_C_9(2IPO)
PYRB_ECOLI
[Raw transfer]




CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]




EOP_A_7(2FZC)
PYRB_ECOLI
[Raw transfer]




CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]




PCT_C_10(2HSE)
PYRB_ECOLI
[Raw transfer]




EOB_C_10(2FZG)
PYRB_ECOLI
[Raw transfer]




PCT_A_6(2HSE)
PYRB_ECOLI
[Raw transfer]




EOB_A_9(2FZG)
PYRB_ECOLI
[Raw transfer]




EOZ_C_8(2FZK)
PYRB_ECOLI
[Raw transfer]




EOP_C_8(2FZC)
PYRB_ECOLI
[Raw transfer]




PCT_A_7(2A0F)
PYRB_ECOLI
[Raw transfer]




FLC_B_5(3D6N)
PYRB_AQUAE
[Raw transfer]




EOZ_A_7(2FZK)
PYRB_ECOLI
[Raw transfer]




AL0_G_9(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_A_9(1R0C)
PYRB_ECOLI
[Raw transfer]




AL0_A_10(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_G_10(1R0C)
PYRB_ECOLI
[Raw transfer]




ASP_A_9(2HSE)
PYRB_ECOLI
[Raw transfer]




CP_C_13(1ZA2)
PYRB_ECOLI
[Raw transfer]




CP_A_12(1ZA2)
PYRB_ECOLI
[Raw transfer]




27 PsiBlast_CBE 92.48100% -94 - C8 -3R7F 3.5 PYRB_BACSU
111 HHSearch 91.3399% -91 - C8 -3R7F 4.5 PYRB_BACSU
1 PsiBlast_PDB 91.20100% -95 - C8 -3R7D - PYRB_BACSU -
26 PsiBlast_CBE 90.80100% -91 - C8 -3R7F 4.3 PYRB_BACSU
2 PsiBlast_PDB 90.50100% -89 - C8 -3R7F 4.5 PYRB_BACSU
28 PsiBlast_CBE 90.19100% -91 - C8 -3R7D - PYRB_BACSU -
29 PsiBlast_CBE 89.86100% -92 - C8 -3R7D - PYRB_BACSU -
3 PsiBlast_PDB 88.78100% -87 - C8 -3R7L - PYRB_BACSU -
22 PsiBlast_CBE 88.32100% -85 - C8 -3R7L - PYRB_BACSU -
25 PsiBlast_CBE 88.25100% -88 - C8 -3R7L - PYRB_BACSU -
24 PsiBlast_CBE 88.24100% -85 - C8 -3R7L - PYRB_BACSU -
23 PsiBlast_CBE 88.08100% -86 - C8 -3R7L - PYRB_BACSU -
21 PsiBlast_CBE 87.38100% -84 - C8 -3R7L - PYRB_BACSU -
4 PsiBlast_PDB 85.7399% - - C8 -2AT2 - PYRB_BACSU -
51 PsiBlast_CBE 78.6736%-123 - C8 -2RGW - PYRB_METJA -
49 PsiBlast_CBE 78.3936%-120 - C8 -2RGW - PYRB_METJA -
50 PsiBlast_CBE 77.3936%-121 - C8 -2RGW - PYRB_METJA -
47 PsiBlast_CBE 77.3236%-121 - C8 -2RGW - PYRB_METJA -
48 PsiBlast_CBE 76.8236%-118 - C8 -2RGW - PYRB_METJA -
12 PsiBlast_PDB 76.7636%-121 - C8 -2RGW - PYRB_METJA -
123 HHSearch 73.2035%-104 - C8 -1ML4 7.9 PYRB_PYRAB
6 PsiBlast_PDB 72.6741%-103 - C8 -4BJH 6.0 PYRB_AQUAE
5 PsiBlast_PDB 72.6741%-105 - C8 -3D6N 3.4 PYRB_AQUAE
10 PsiBlast_PDB 71.0635%-108 - C8 -1ML4 7.9 PYRB_PYRAB
78 PsiBlast_CBE 70.3234%-100 - C8 -2FZK 1.6 PYRB_ECOLI
80 PsiBlast_CBE 69.9634%-102 - C8 -2FZG 2.8 PYRB_ECOLI
82 PsiBlast_CBE 69.3734%-101 - C8 -2FZC 2.2 PYRB_ECOLI
79 PsiBlast_CBE 67.8834% -98 - C8 -2FZK 3.8 PYRB_ECOLI
86 PsiBlast_CBE 67.8334% -97 - C8 -1ZA2 2.9 PYRB_ECOLI
83 PsiBlast_CBE 67.7634% -96 - C8 -2FZC 3.3 PYRB_ECOLI
54 PsiBlast_CBE 67.7534% -95 - C8 -1EKX 7.5 PYRB_ECOLI
57 PsiBlast_CBE 67.6634% -92 - C8 -4KH0 8.0 ?
87 PsiBlast_CBE 67.6034% -99 - C8 -1ZA2 2.8 PYRB_ECOLI
85 PsiBlast_CBE 67.6034% -98 - C8 -2AIR 3.1 PYRB_ECOLI
53 PsiBlast_CBE 67.5534% -94 - C8 -1EKX 7.7 PYRB_ECOLI
64 PsiBlast_CBE 67.3234% -92 - C8 -4KGV 7.9 ?
75 PsiBlast_CBE 67.2634% -91 - C8 -2IPO 6.0 PYRB_ECOLI
84 PsiBlast_CBE 67.0934% -93 - C8 -2AIR 2.9 PYRB_ECOLI
81 PsiBlast_CBE 67.0434% -92 - C8 -2FZG 5.1 PYRB_ECOLI
62 PsiBlast_CBE 66.8934% -89 - C8 -4KGX 8.0 ?
89 PsiBlast_CBE 66.8334% -96 - C8 -1R0C 3.7 PYRB_ECOLI
74 PsiBlast_CBE 66.4834% -93 - C8 -2IPO 6.4 PYRB_ECOLI
61 PsiBlast_CBE 66.4834% -89 - C8 -4KGX 7.9 ?
55 PsiBlast_CBE 66.4334% -91 - C8 -4KH1 7.9 ?
17 PsiBlast_PDB 66.4134% -93 - C8 -1EKX 7.6 PYRB_ECOLI
16 PsiBlast_PDB 66.3934% -90 - C8 -2HSE 3.4 PYRB_ECOLI
67 PsiBlast_CBE 66.3334% -90 - C8 -4F04 8.0 PYRB_ECOLI
77 PsiBlast_CBE 66.2534% -92 - C8 -2H3E 7.3 PYRB_ECOLI
56 PsiBlast_CBE 66.1934% -90 - C8 -4KH1 8.1 ?
63 PsiBlast_CBE 66.1234% -90 - C8 -4KGV 8.0 ?
76 PsiBlast_CBE 65.9834% -88 - C8 -2H3E 7.3 PYRB_ECOLI
88 PsiBlast_CBE 65.8734% -97 - C8 -1R0C 3.6 PYRB_ECOLI
58 PsiBlast_CBE 65.7134% -89 - C8 -4KH0 8.0 ?
66 PsiBlast_CBE 65.3134% -91 - C8 -4F04 7.9 PYRB_ECOLI
52 PsiBlast_CBE 64.3434% -88 - C8 -2HSE 3.3 PYRB_ECOLI
15 PsiBlast_PDB 61.7134% -84 - C8 -2A0F 2.9 PYRB_ECOLI