@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15680: (2016-06-24 )
MKERGLLIVLSGPSGVGKGTVRQAIFSQEDTKFEYSISVTTRSPREGEVNGVDYFFKTRDEFEQMIADNKLLEWAEYVGNYYGTPVDYVEQTLQDGKDVFLEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDALIENRMKAAKAEIEMMDAYDYVVENDNVETACDKIKAIVLAEHLKRERVAPRYKKMLEVE

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0O2_B_8(4QRH)
?
[Raw transfer]




G5P_G_7(2F3R)
KGUA_ECOLI
[Raw transfer]




0O2_C_12(4QRH)
?
[Raw transfer]




GDP_S_19(2AN9)
KGUA_ECOLI
[Raw transfer]




G5P_J_10(2F3R)
KGUA_ECOLI
[Raw transfer]




5GP_D_15(2J41)
KGUA_STAAC
[Raw transfer]




0O2_D_18(4QRH)
?
[Raw transfer]




5GP_C_11(2J41)
KGUA_STAAC
[Raw transfer]




GDP_M_13(2AN9)
KGUA_ECOLI
[Raw transfer]




5GP_B_8(2J41)
KGUA_STAAC
[Raw transfer]




5GP_A_2(2QOR)
?
[Raw transfer]




5GP_M_13(2ANB)
KGUA_ECOLI
[Raw transfer]




5GP_D_4(1EX7)
KGUA_YEAST
[Raw transfer]




5GP_D_4(1GKY)
KGUA_YEAST
[Raw transfer]




5GP_D_4(1EX7)
KGUA_YEAST
[Raw transfer]




5GP_A_4(3TR0)
KGUA_COXBU
[Raw transfer]




5GP_A_4(3TR0)
KGUA_COXBU
[Raw transfer]




GDP_B_2(1ZNZ)
KGUA_MYCTU
[Raw transfer]




GDP_B_2(1ZNY)
KGUA_MYCTU
[Raw transfer]




5GP_B_2(1ZNX)
KGUA_MYCTU
[Raw transfer]




FMT_A_3(1S4Q)
KGUA_MYCTU
[Raw transfer]




LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]




FMT_B_2(1Z8F)
KGUA_MYCTU
[Raw transfer]




LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]




LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]




LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]




ADP_C_3(1LVG)
KGUA_MOUSE
[Raw transfer]




ADP_C_3(1LVG)
KGUA_MOUSE
[Raw transfer]




EPE_G_7(1Z6G)
?
[Raw transfer]




51 HHSearch 89.8069%-105 - C3 -3TAU - KGUA_LISMO -
3 PsiBlast_PDB 89.2667%-107 - C3 -3TAU - KGUA_LISMO -
1 PsiBlast_PDB 86.9965%-117 - C3 -4QRH - ? -
52 HHSearch 86.7665%-115 - C3 -4QRH - ? -
24 PsiBlast_CBE 85.8165%-113 - C3 -2J41 7.3 KGUA_STAAC
23 PsiBlast_CBE 85.6665%-106 - C3 -4QRH 10.6 ?
17 PsiBlast_PDB 84.9538%-136 - C3 -1ZNY 3.1 KGUA_MYCTU
22 PsiBlast_CBE 84.3565%-106 - C3 -4QRH 10.6 ?
14 PsiBlast_PDB 84.0039%-132 - C3 -1S4Q 3.5 KGUA_MYCTU
16 PsiBlast_PDB 83.3938%-135 - C3 -1ZNX 4.7 KGUA_MYCTU
21 PsiBlast_CBE 83.1565%-105 - C3 -4QRH 10.4 ?
25 PsiBlast_CBE 82.8565%-111 - C3 -2J41 7.5 KGUA_STAAC
19 PsiBlast_PDB 82.4338%-133 - C3 -1Z8F 3.4 KGUA_MYCTU
15 PsiBlast_PDB 82.1938%-135 - C3 -1ZNW - KGUA_MYCTU -
26 PsiBlast_CBE 81.4365%-115 - C3 -2J41 7.2 KGUA_STAAC
2 PsiBlast_PDB 81.0365%-120 - C3 -2J41 - KGUA_STAAC -
70 HHSearch 80.7942%-100 - C3 -1S96 - KGUA_ECOLI -
18 PsiBlast_PDB 80.3938%-128 - C3 -1ZNZ 3.7 KGUA_MYCTU
65 HHSearch 80.3438%-134 - C3 -1ZNW - KGUA_MYCTU -
13 PsiBlast_PDB 78.0541% -98 - C3 -1S96 - KGUA_ECOLI -
4 PsiBlast_PDB 76.9942% -93 - C3 -2AN9 6.2 KGUA_ECOLI
7 PsiBlast_PDB 75.9942% -98 - C3 -2F3R 8.8 KGUA_ECOLI
30 PsiBlast_CBE 75.2942% -97 - C3 -2F3R 7.7 KGUA_ECOLI
29 PsiBlast_CBE 75.0642% -95 - C3 -2F3T 3.4 KGUA_ECOLI
31 PsiBlast_CBE 74.8542% -90 - C3 -2AN9 6.5 KGUA_ECOLI
28 PsiBlast_CBE 73.8142% -91 - C3 -2F3T 4.0 KGUA_ECOLI
27 PsiBlast_CBE 73.8142% -89 - C3 -2F3T 2.7 KGUA_ECOLI
8 PsiBlast_PDB 73.6742% -90 - C3 -2F3T 4.6 KGUA_ECOLI
20 PsiBlast_PDB 73.3537%-107 - C3 -3TR0 6.6 KGUA_COXBU
5 PsiBlast_PDB 72.8042% -87 - C3 -2ANB 5.8 KGUA_ECOLI
64 HHSearch 70.1644% -77 * C3 *1EX7 7.0 KGUA_YEAST
55 HHSearch 69.4736% -95 - C3 -3TR0 6.6 KGUA_COXBU
63 HHSearch 68.7030%-101 - C3 -1Z6G 3.4 ?
10 PsiBlast_PDB 68.5645% -81 - C3 -1EX7 7.0 KGUA_YEAST
11 PsiBlast_PDB 67.6545% -78 - C3 -1GKY 7.4 KGUA_YEAST
53 HHSearch 65.0734% -77 - C3 -2QOR 8.8 ?
33 PsiBlast_CBE 64.3435% -80 - C3 -1LVG 7.2 KGUA_MOUSE
57 HHSearch 62.9635% -76 - C3 -1LVG 7.2 KGUA_MOUSE