@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15700: (2016-06-24 )
MLNNRNVLLCVSGGIAVYKACALTSKLVQAGANVKVIMTESACRFVSPLTFQALSRHEVYTDTFKEQNPSVISHIDAADWADLIIVAPATANVIGKLANGIADDMLTTTLLAATAPVWIAPAMNVHMYDHPAVKRNISVLYQDGYCFIEPSEGYLACGYVGKGRLEEPENIVKLAEKHFAEETSAPLEGKHVVITAGPTREAIDPVRFFTNKSTGKMGYALAEAAVQLGARVILISGPVSLDQPKGLAEFIPVQSAADMREAVLSVYDASDIVIKTAAVADFTPKTVFDHKMKKQDGGMTLELKRTVDILKELGEKKKEQILVGFAAETQDIEHYARKKLAAKNLDLIVANDVKANGAGFGADTNIVTIFFKDGHKRELPIMSKLDVSFEILQEIAALSKQTGERS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]




PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]




PMT_G_7(1U7Z)
COABC_ECOLI
[Raw transfer]




CTP_B_8(1U7W)
COABC_ECOLI
[Raw transfer]




PMT_F_6(1U7Z)
COABC_ECOLI
[Raw transfer]




CTP_A_7(1U7W)
COABC_ECOLI
[Raw transfer]




C5P_K_11(1U80)
COABC_ECOLI
[Raw transfer]




CTP_A_3(4QJI)
?
[Raw transfer]




CTP_B_5(4QJI)
?
[Raw transfer]




CTP_A_3(4QJI)
?
[Raw transfer]




C5P_J_10(1U80)
COABC_ECOLI
[Raw transfer]




C5P_I_9(1U80)
COABC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 75.9859%-102 - C2 -5INT - ? -
23 PsiBlast_CBE 75.8641%-104 - C2 -1U7Z 10.8 COABC_ECOLI
5 PsiBlast_PDB 75.0241%-108 - C2 -1U80 4.2 COABC_ECOLI
3 PsiBlast_PDB 74.5141%-123 - C2 -1U7W 4.6 COABC_ECOLI
25 PsiBlast_CBE 74.2041%-130 - C2 -1U7W 4.0 COABC_ECOLI
26 PsiBlast_CBE 74.0637%-106 - C2 -4QJI 5.4 ?
30 Fugue 73.4440%-102 - C2 -1U7Z 10.2 COABC_ECOLI
42 HHSearch 73.3038%-112 - C2 -4QJI 5.0 ?
4 PsiBlast_PDB 73.1041%-106 - C2 -1U7Z - COABC_ECOLI -
24 PsiBlast_CBE 72.8741%-103 - C2 -1U7Z 8.6 COABC_ECOLI
55 HHSearch 72.4341%-103 - C2 -1U7Z 10.2 COABC_ECOLI
22 PsiBlast_CBE 72.3741%-108 - C2 -1U80 3.8 COABC_ECOLI
6 PsiBlast_PDB 72.1037%-114 - C2 -4QJI 5.1 ?
21 PsiBlast_CBE 71.9141%-109 - C2 -1U80 3.6 COABC_ECOLI
47 HHSearch 68.8032%-178 * C2 *1MVL - HAL3A_ARATH -
2 PsiBlast_PDB 68.1941%-120 - C2 -1U7U - COABC_ECOLI -
32 Fugue 64.6130%-151 - C2 -1E20 - HAL3A_ARATH -
45 HHSearch 64.5728%-181 - C2 -3QJG - ? -
46 HHSearch 64.5135%-195 - C2 -1QZU - COAC_HUMAN -
41 HHSearch 64.3528%-114 - C2 -2GK4 - ? -