@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15880: (2016-06-25 )
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MLC_C_3(2F3X)
FAPR_BACSU
[Raw transfer]




MLC_C_3(2F3X)
FAPR_BACSU
[Raw transfer]




MLC_C_3(2F3X)
FAPR_BACSU
[Raw transfer]




MLC_D_4(2F3X)
FAPR_BACSU
[Raw transfer]




MLC_B_4(4A0Z)
?
[Raw transfer]




MLC_A_3(4A0Z)
?
[Raw transfer]




MLC_B_4(4A0Z)
?
[Raw transfer]




MLC_B_4(4A0Z)
?
[Raw transfer]




20 HHSearch 87.0099%-104 - C5 -2F3X 2.8 FAPR_BACSU
4 PsiBlast_PDB 86.8747%-111 - C5 -4A0Y - ? -
40 Fugue 86.17100%-101 - C5 -2F3X 2.8 FAPR_BACSU
1 PsiBlast_PDB 86.17100%-101 - C5 -2F3X 2.8 FAPR_BACSU
19 HHSearch 85.6047%-110 - C5 -4A0Z 2.9 ?
39 Fugue 85.3246%-110 - C5 -4A0Z 3.6 ?
5 PsiBlast_PDB 85.0947%-109 - C5 -4A0Z 2.9 ?
16 PsiBlast_CBE 84.96100% -83 - C5 -2F3X 2.7 FAPR_BACSU
3 PsiBlast_PDB 84.5147%-104 - C5 -4A0X - ? -
21 HHSearch 82.75100%-131 - C5 -2F41 - FAPR_BACSU -
2 PsiBlast_PDB 82.53100%-129 - C5 -2F41 - FAPR_BACSU -
6 PsiBlast_PDB 79.9846%-100 - C5 -4A12 - ? -
17 PsiBlast_CBE 75.1147%-113 - C5 -4A0Z 3.5 ?
18 PsiBlast_CBE 67.2647%-106 - C5 -4A0Y - ? -
24 HHSearch 64.1229%-112 - C5 -1IXL - ? -
7 PsiBlast_PDB 62.7933%-136 - C5 -1IXL - ? -
23 HHSearch 57.3524%-111 - C5 -3BNV - ? -
37 HHSearch 56.8021%-135 * C5 *1ZKI - ? -
33 HHSearch 55.1816%-104 - C5 -3LBE - ? -
22 HHSearch 55.0512%-143 - C5 -3E1E - ? -