@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15900: (2016-06-25 )
MSKIAFLFPGQGSQFIGMGKELYEQVPAAKRLFDEADETLETKLSSLIFEGDAEELTLTYNAQPALLTTSIAVLEKFKESGITPDFTAGHSLGEYSALVAAGALSFKDAVYTVRKRGEFMNEAVPAGEGAMAAILGMDAEALKQVTDKVTEEGNLVQLANLNCPGQIVISGTAKGVELASELAKENGAKRAIPLEVSGPFHSELMKPAAEKLKEVLDACDIKDADVPVISNVSADVMTEKADIKEKLIEQLYSPVRFEESINKLIAEGVTTFIEIGPGKVLSGLVKKVNRRLKTIAVSDPETIELAIQTLKEENDNA

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]



GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



GLY_A_2(3TQE)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



GLY_A_2(3TQE)
?
[Raw transfer]



AE4_A_9(2C2N)
FABD_HUMAN
[Raw transfer]



AE4_A_9(2C2N)
FABD_HUMAN
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



NHE_A_2(3R97)
?
[Raw transfer]



CXS_A_14(3HJV)
?
[Raw transfer]



ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]
21 PsiBlast_CBE 84.1049%-113 - C1 -3QAT - ? -
38 HHSearch 83.5849%-110 - C1 -3QAT - ? -
1 PsiBlast_PDB 82.7149%-112 - C1 -3QAT - ? -
47 HHSearch 80.8445%-113 - C- -3EZO - ? -
2 PsiBlast_PDB 80.8245%-112 - C- -3EZO - ? -
46 HHSearch 80.7643%-106 - C1 -3TQE 3.2 ?
36 HHSearch 79.7143%-104 - C1 -3PTW - ? -
15 PsiBlast_PDB 79.5642%-100 - C1 -3H0P - FABD_SALTY -
6 PsiBlast_PDB 79.5642%-104 - C1 -3PTW - ? -
9 PsiBlast_PDB 78.9744%-102 - C1 -2G2O - FABD_ECOLI -
43 HHSearch 78.9345%-102 - C1 -1MLA - FABD_ECOLI -
7 PsiBlast_PDB 78.5244%-102 - C1 -1MLA - FABD_ECOLI -
8 PsiBlast_PDB 78.1344%-101 - C1 -2G1H 3.1 FABD_ECOLI
16 PsiBlast_PDB 77.5741%-105 - C1 -3TQE 3.2 ?
11 PsiBlast_PDB 77.4844%-102 - C1 -2G2Z 3.8 FABD_ECOLI
4 PsiBlast_PDB 77.2447%-105 - C1 -3IM8 - ? -
10 PsiBlast_PDB 75.8344%-100 - C1 -2G2Y - FABD_ECOLI -
5 PsiBlast_PDB 75.8045%-106 - C1 -3HJV 3.1 ?
54 HHSearch 74.9343%-102 * C1 *3K89 2.9 ?
14 PsiBlast_PDB 73.7845% -92 - C1 -2CUY - ? -
55 HHSearch 71.9434%-103 - C1 -2C2N 2.0 FABD_HUMAN
12 PsiBlast_PDB 71.8743%-100 - C1 -3K89 2.9 ?
13 PsiBlast_PDB 71.5943%-102 - C1 -3R97 2.6 ?
23 PsiBlast_CBE 66.1332%-101 - C1 -2C2N 2.0 FABD_HUMAN
27 Fugue 62.4732% -94 - C1 -1NM2 2.9 ?
48 HHSearch 60.8632% -98 - C1 -1NM2 2.9 ?
25 PsiBlast_CBE 59.4731% -93 - C1 -2QC3 3.9 FABD_MYCTU
24 PsiBlast_CBE 56.7632% -87 - C1 -1NM2 2.9 ?
52 HHSearch 53.8430% -88 - C1 -2QC3 3.9 FABD_MYCTU