@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15930: (2016-06-25 )
MSKHSHYKDKKKFYKKVEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGLEPVESFLKVYVFPKINDGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEKGPAHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKLQKHHTKQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A_C_12(4M30)
RNC_AQUAE
[Raw transfer]



A_D_16(4M30)
RNC_AQUAE
[Raw transfer]



C_C_9(4M2Z)
RNC_AQUAE
[Raw transfer]



C_D_12(4M2Z)
RNC_AQUAE
[Raw transfer]



NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]
-
NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]
-
NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]
-
NACID_C_1(2NUG)
RNC_AQUAE
[Raw transfer]
-
A_D_16(4M30)
RNC_AQUAE
[Raw transfer]
11 PsiBlast_PDB 86.8631%-112 - C3 -4M2Z 2.8 RNC_AQUAE
22 PsiBlast_CBE 86.5731%-116 - C3 -4M30 3.1 RNC_AQUAE
12 PsiBlast_PDB 86.4531%-109 - C3 -4M30 4.1 RNC_AQUAE
9 PsiBlast_PDB 85.9731%-110 - C3 -2NUF - RNC_AQUAE -
10 PsiBlast_PDB 85.5031%-113 - C3 -2NUG 4.1 RNC_AQUAE
24 PsiBlast_CBE 85.4531%-117 - C3 -2NUG 4.9 RNC_AQUAE
23 PsiBlast_CBE 85.2731%-115 - C3 -4M2Z 2.8 RNC_AQUAE
6 PsiBlast_PDB 85.1831%-121 - C3 -1YYK - RNC_AQUAE -
27 PsiBlast_CBE 84.8631%-119 - C3 -1YYK - RNC_AQUAE -
25 PsiBlast_CBE 84.7031%-112 - C3 -2NUF - RNC_AQUAE -
14 PsiBlast_PDB 83.7430%-119 - C3 -1YYO - RNC_AQUAE -
13 PsiBlast_PDB 83.1430%-117 - C3 -1YZ9 - RNC_AQUAE -
16 PsiBlast_PDB 82.9730%-109 - C3 -2EZ6 - RNC_AQUAE -
8 PsiBlast_PDB 82.3831%-107 - C3 -2NUE - RNC_AQUAE -
15 PsiBlast_PDB 81.6830%-109 - C3 -1RC7 - RNC_AQUAE -
1 PsiBlast_PDB 80.0141% -81 - C3 -1O0W - RNC_THEMA -
26 PsiBlast_CBE 79.1531%-101 - C3 -1YYW - RNC_AQUAE -
7 PsiBlast_PDB 78.8531%-101 - C3 -1YYW - RNC_AQUAE -
49 HHSearch 78.5931%-106 - C3 -2NUG 4.1 RNC_AQUAE
2 PsiBlast_PDB 72.5138%-166 - C- -3N3W - RNC_CAMJE -